Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2447 |
Symbol | |
ID | 6476937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2751712 |
End bp | 2752491 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 642731635 |
Product | Conjugal transfer protein TrbG/VirB9/CagX |
Protein accession | YP_002028833 |
Protein GI | 194366223 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3504] Type IV secretory pathway, VirB9 components |
TIGRFAM ID | [TIGR02781] P-type conjugative transfer protein VirB9 |
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Plasmid Coverage information |
Num covering plasmid clones | 36 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAGTC GAAATATCAG GGGAAGCGCA CTGGTGCTGC TGTCGATGTT GTCGCTGTTG TTTTCAGCAG CGGCGATGGC GCAGGCGGTG GACCACTACG AGTACGAGAA GGACCGCATC TATCCGGTTC GCACCGGCCT GGGCCTGACC ACCCAGATCG AACTGAGCCC GAACGAGAAG ATCCTCGACT ACAGCACCGG CTTCAGCAGC GGCTGGGAAC TGACCCGTCG CGAAAACGTG TTCTACATCA AGCCGAAGAA CGTCGACGTC GACACCAACA TGATGGTGCG CACCGAGACT CATTCCTACA TCTTCGAGCT GAAGGTGGTG GCCACTGATT GGCGCCAGCT GGAACAGGCC CGTCGTGCAG GCGTGCAGTA CAAGATTGCC TTCGTCTATC CCAACGACAC CGTGTTCGGC GTCGCCCAGG AGGCGGTCGA GGAAGAGGCC AAGCCGCTGT TGAGCTCTGA ACTGGCCAAG GACCGCCAGT ACAACTTCAA CTACTCCTAT TCGACCAGCA AGGCGAAAAA GATGGGGTGG TTGATCCCGG TCAACGCCTA CGACGATGGC CGCTTCACCT ATCTGAAGCT GCCGAACTCG CCGGAATACA AGACCGGCAT ATTCCCGGCC GTGTTCGGCC GTGAAACGGA ATACGGTGAA GACTTCGTGG TCAACACCAC GGTTGAAGGC AATACGCTGA TCGTGCACGG GACGCACCCG TACCTGGTCA TCCGCCATGG CGACTTCGTC GTCGGCCTGC GAAGGAACGT GAAGAAATGA
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Protein sequence | MSSRNIRGSA LVLLSMLSLL FSAAAMAQAV DHYEYEKDRI YPVRTGLGLT TQIELSPNEK ILDYSTGFSS GWELTRRENV FYIKPKNVDV DTNMMVRTET HSYIFELKVV ATDWRQLEQA RRAGVQYKIA FVYPNDTVFG VAQEAVEEEA KPLLSSELAK DRQYNFNYSY STSKAKKMGW LIPVNAYDDG RFTYLKLPNS PEYKTGIFPA VFGRETEYGE DFVVNTTVEG NTLIVHGTHP YLVIRHGDFV VGLRRNVKK
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