Gene Smal_2427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2427 
Symbol 
ID6476917 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2729669 
End bp2730193 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content67% 
IMG OID642731615 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_002028813 
Protein GI194366203 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.777873 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.277053 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGACG CCCTGGGTGT GCCGGTGCAC GACACCGACG AACACTGGAT GCGCCACGCG 
CTGGCGCTGG CCGAGCGCGC ACAGCGCGAG TTCGACGAGA TCCCGGTGGG TGCGGTGCTG
GTCAGTGCCG ACGGCCAGCT GCTGGGTGAG GGCTGGAACC TCAACATTGC TTCGCACGAC
CCCAGTGCGC ATGCCGAAAT CGTGGCCATG CGTTCAGGTG GAAAACTGCT CGCCAACCAT
CGCCTGCTCG GCAGCACCCT GTATGTGACC CTGGAGCCGT GCGCAATGTG CGCGATGGCG
ATCGTGCACG CGCGCGTTGC ACGACTGGTC TACGGGGCCA GCGATCCCAA GACCGGGGCC
TGCGGCAGTG TGTTCGACCT GCTCGGCGAT GGTCGCCACA ACCACCGGGT GGAGATCCAC
GGTGGGGTGC TGGCCAAGGA AGCCAGCATG CGCCTGACCA ACTATTTCCG CACCAAGCGC
GGCAAGCCTC CGCTGCTGCT GGAAGACCAC GCCGGCGAGG GCTGA
 
Protein sequence
MTDALGVPVH DTDEHWMRHA LALAERAQRE FDEIPVGAVL VSADGQLLGE GWNLNIASHD 
PSAHAEIVAM RSGGKLLANH RLLGSTLYVT LEPCAMCAMA IVHARVARLV YGASDPKTGA
CGSVFDLLGD GRHNHRVEIH GGVLAKEASM RLTNYFRTKR GKPPLLLEDH AGEG