| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2426 |
|---|
| Symbol | |
|---|
| ID | 6476916 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2729022 |
|---|
| End bp | 2729594 |
|---|
| Gene Length | 573 bp |
|---|
| Protein Length | 190 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642731614 |
|---|
| Product | oligoribonuclease |
|---|
| Protein accession | YP_002028812 |
|---|
| Protein GI | 194366202 |
|---|
| COG category | [A] RNA processing and modification |
|---|
| COG ID | [COG1949] Oligoribonuclease (3'->5' exoribonuclease) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.471024 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.142908 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGGACA ACGGCGCGGC CAACGAACGA CTGATCTGGA TCGACCTGGA AATGACCGGG
TTGGATACCG ACAACGATTC GATCATCGAG ATCGCCACCG TGGTCACCGA CGCCCAGCTT
AACGTGCTGG CTGAAGGTCC AGAATTCGCC ATCCACCATC CGCTGGAAAC GCTGGAAGCG
ATGGACGAGT GGAACCGCAA CCAGCACCGC CGCTCGGGCC TGTGGCAGCG TGTGGTGGAC
AGCACGGTGA CCCTTGCCCA GGCTGAGGCG CAGACGGTGA ATTTCCTGGC GCAGTGGATT
CCGGCCGGCC TGTCGCCGAT GTGCGGCAAC TCGATCTGCC AGGATCGCCG CTTCCTGCAC
CGCCAGATGC CGCGCCTGGA GAAGTACTTC CACTACCGCA ACCTGGACGT GTCCACGGTG
AAGGAACTGG CCAAGCGCTG GGCGCCGACC GTGGCCGCCG GCGTCGGCAA GAACAGCAAC
CACACCGCGC TGAGCGATGT GCACGATTCG ATTGCCGAGC TGCGTCACTA TCGCCAGTTC
ATGGGCGCGC TGTCGGGGTT GCCCACGGCC TGA
|
|---|
| Protein sequence | MADNGAANER LIWIDLEMTG LDTDNDSIIE IATVVTDAQL NVLAEGPEFA IHHPLETLEA
MDEWNRNQHR RSGLWQRVVD STVTLAQAEA QTVNFLAQWI PAGLSPMCGN SICQDRRFLH
RQMPRLEKYF HYRNLDVSTV KELAKRWAPT VAAGVGKNSN HTALSDVHDS IAELRHYRQF
MGALSGLPTA
|
|---|
| |