Gene Smal_2425 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2425 
Symbol 
ID6476915 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2727990 
End bp2728862 
Gene Length873 bp 
Protein Length290 aa 
Translation table11 
GC content67% 
IMG OID642731613 
ProductLasA 
Protein accessionYP_002028811 
Protein GI194366201 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.930714 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.104179 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGC CCATCCTGCT CCCTCGCGAC ATTGCTCACG ACGCCCGCGA CTGGTCTGAC 
CTGCAGCGGG CGGTGACCCT GCTGGAAGCG CCAACCCTGA CCGCGCGCAT GGCCAATCTG
GTCGGTACGC CGCTGGAGTT CGCGGTGAAG GCGCTGCCCA GCTCGGTCTC CAACCGCATC
CACGGCGCGG TGCAGGCGGC GCTGACCAAG TCGGCGCAGG CCGCGCTGTG GAGCATGGAC
AACACCCCCG GCAAGGGCGC ATCCACCCGT TGGCACAAGC TGGCCGCAGC GACCTCCGGT
GCGGTTGGCG GCGCTTTTGG TTTTGCTGCG CTGTTCATCG AGTTGCCGGT GTCGACCACC
ATCATGATGC GCGCCGTGGC CGACGTGGCT CGCAGCGAAG GCTTCGACCT GTCCGAGTTC
AGTACCCGCC AGGCCTGCCT GGAGGTGTTC GCGCTGGGTG GCAACTCGCC GCGCGATGAC
GCCAGCGAGA CTGGCTATTA CCTGGCCCGG GGCTTCACCA CCGATGTGAT GCGCCATCTG
TCGGCTGAGC TGGCCGGGCG CGTGGTGACC GGCCGTGACC TTACCCTGGG CGTGGCACCG
AAGGAAGCCG GCAAGCTGCT GGCGAAGATG GTGGAGAAGG TGGCCGCGCG CTTCGGCGTG
GTGGTCACCG AGAAATTCGC CGCACAGGCG GTGCCGATCG TGGGTGCGGC TGCCGGTGCG
ACACTCAATA CGATGTTCAC CGATTACTAC CAGGACATGG CGCGCGGCCA CTTCATCGTG
CGCCGGCTGG AGCGCAAGTA CGGCGAAGAC GTAGTGCGCA CCTGCTATGA CCGTGTGGCG
CACGGCGGGG CGTTGATCGA GCCCACGTTG TAA
 
Protein sequence
MNEPILLPRD IAHDARDWSD LQRAVTLLEA PTLTARMANL VGTPLEFAVK ALPSSVSNRI 
HGAVQAALTK SAQAALWSMD NTPGKGASTR WHKLAAATSG AVGGAFGFAA LFIELPVSTT
IMMRAVADVA RSEGFDLSEF STRQACLEVF ALGGNSPRDD ASETGYYLAR GFTTDVMRHL
SAELAGRVVT GRDLTLGVAP KEAGKLLAKM VEKVAARFGV VVTEKFAAQA VPIVGAAAGA
TLNTMFTDYY QDMARGHFIV RRLERKYGED VVRTCYDRVA HGGALIEPTL