Gene Smal_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2423 
Symbol 
ID6476913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2725701 
End bp2726594 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content66% 
IMG OID642731611 
ProductMscS Mechanosensitive ion channel 
Protein accessionYP_002028809 
Protein GI194366199 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.591216 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0692547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCGCTA CTGCCCCACC CGCCCCCGCC GCAACGCCCT GGTTCCACTC ACTCGATTGG 
GAACGCCTGC TGGAGACCTA CGGCGTGCCG TTGCTGGCCG CGATCGTGGT GCTGCTGGTC
GGCATGTGGG TGGCACGACG CCTGTCCAAT GCGATGCCAC GCGCCACCGC GCGCATGGGC
GTGGACCCAA TGCTGGGCAG CTTCCTGCGC AACGTGGTCT ATGCCACGTC GCTGGTGATC
GTTGTGGTAT TGGCCATTGG TACGCTGGGC GTGCAGATCA CCCCGCTGCT GGCCGTGCTC
GGCACCGCCG GCCTGGCGGT GGGCCTGGCG CTGAAGGACT CGCTGTCCAA CATCGCCTCG
GGCGTGATGC TGGTGACACT GCGTCCGTTC CGTGTCGGTG ATGTGGTGAC GGTGGCCGGG
CAGACCGGCA CGGTTCGCGA GGTGCGTATC TTCCAGACCG TCATCACTGG TGCCGACAAC
CAGCACACCA CCATTCCAAA CACGTTGATC ACCGCTGCGC CGATCATCAA CCTGACCGCC
GAACCGACCC GCCGTGTCGA ACTGGTGGTG GGCATCGGCT ACGAAGACAA CATCCAGCTG
GCGCGCGACA CCGCGCTGGC GCTGATGAAG GCCGACCCGC GCGTGCTACA GACACCGGCA
CCGGATGTGG TGGTGTATGA GCTGGGTGCG CACGCGATCA ACCTCGGCAT CCGCTGCTAC
GTGAAGTCCG CCGACTGGTT CGGCACCAAG GTCACGCTGC TGGAGCAGCT CAAGCTGGGC
TTCGACAGGG CCGGGATCAA CATTCCGTAT CCGCAGCAGG ACATGCACCT GTACCTGCAT
GGCAAGGATG GCGGCGTGGT CGAGGCCGAC GCGCTGGTGC GCGACAAGCC CTGA
 
Protein sequence
MLATAPPAPA ATPWFHSLDW ERLLETYGVP LLAAIVVLLV GMWVARRLSN AMPRATARMG 
VDPMLGSFLR NVVYATSLVI VVVLAIGTLG VQITPLLAVL GTAGLAVGLA LKDSLSNIAS
GVMLVTLRPF RVGDVVTVAG QTGTVREVRI FQTVITGADN QHTTIPNTLI TAAPIINLTA
EPTRRVELVV GIGYEDNIQL ARDTALALMK ADPRVLQTPA PDVVVYELGA HAINLGIRCY
VKSADWFGTK VTLLEQLKLG FDRAGINIPY PQQDMHLYLH GKDGGVVEAD ALVRDKP