| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2410 |
|---|
| Symbol | |
|---|
| ID | 6476900 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2712447 |
|---|
| End bp | 2714834 |
|---|
| Gene Length | 2388 bp |
|---|
| Protein Length | 795 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642731598 |
|---|
| Product | RNA binding S1 domain protein |
|---|
| Protein accession | YP_002028796 |
|---|
| Protein GI | 194366186 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2183] Transcriptional accessory protein |
|---|
| TIGRFAM ID | [TIGR00426] competence protein ComEA helix-hairpin-helix repeat region |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.367587 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.911918 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGACG CCAAGAACGC CCAGAGCGCG CTCGCCCAGC AGATCGCCCA GACCATCGCC
GACGAGATCG GTGCCCAGTC CACCCAGGTA CGTGCCGCCG TCGGCCTGCT CGACGAGGGC
GCCAGCGTCC CGTTCATCGC CCGCTACCGC AAGGAAGTGA CCGGAGGCCT GGACGACACC
CAGCTGCGCA ACCTGGAAAC CCGCCTCACC TACCTGCGTG AGCTGGAAGA CCGCCGCGCC
GCCGTGTTGT CCAGCATCGG CGAGCAGGGC AAGCTCAGCG ACGAGCTGCG CAACGACATC
CTGGCCGCCG ATACCAAGAG CCGGCTGGAA GACCTGTACC TGCCGTACAA GCCCAAGCGC
CGTACCCGTG CACAGATTGC CCGCGAGGCC GGCCTGGAAC CGCTGGCCGA TGGCCTGCTG
AACGACCCGA CGCGGGACCC GCAGGTCTTT GCCGCTGGTT TCGTCGACAC CGACAAGGGT
GTGGCCGACA CCAAGGCCGC ACTGGAGGGC GCGCGCGCGA TCCTGATGGA GCGCTGGGGT
GAAGACGCCG CGCTGGTCGG TGAACTGCGC ACGTGGCTGG GCGAGACCGG GGTGATCCGT
GCCCGCGTGG CCGAGGGCAA GGAAACCGAA GGCGCCAAGT ACCGCGATTA TTTCGAACAC
GCCGAAGCGC TGGCGAAGAT TCCGTCGCAC CGCCTGCTGG CACTGTTCCG CGCACGCCGC
GAGGAAATCC TGTTCCTGGA GCTGGACCCG GGCAGTGATG CCGAGGCTGG CCACCAGTAC
GCGGAAGGCC GTGTGGCGCG CAAGGCCGGC ATTGCCGACC AGGGGCGCGC TGGCGACCGC
TGGCTGCTGG ATGCCTGTCG CCTGACCTGG CGCGCCAAGC TGCATACCCA TCTGCTGCTG
GACCTGTTCA ACCAGGCCCG CGAAAAGGCC GAGGCCGAAG CCATCGCGGT GTTCGGTGAC
AACCTGAAGG ACCTGCTGCT GGCCGCGCCG GCCGGCCCGA AGACCGTGCT CGGGCTGGAC
CCGGGCATCC GCACCGGCTG CAAGATCGCC GTGGTCGATG CTACCGGCAA GCTGGTCGCC
ACCGAGACCA TCTACCCGCA TGAGCCGCGC CGTCAGTGGG AGCAGTCGCT GCAGACCATC
AAGCAGCTGT GCGCCAAGCA CAACGTGGAA CTGATCGCGA TCGGCAACGG CACCGCCAGC
CGCGAAACCG ACAAGCTGGC CGGTGAGGCG ATCAAGGCCG CGGCCAACCC GAAGCTGCAG
AAGGTGGTGG TCAGCGAGGC CGGTGCCTCG GTGTACTCGG CCTCGGAGTT CGCGGCCAAG
GAGTTCCCGG GCCTGGACGT GTCGCTGCGC GGTGCGGTGT CGATCGCGCG CCGCCTGCAG
GACCCGCTGG CCGAGCTGGT GAAGATCGAG CCCAAGGCGA TCGGTGTCGG CCAGTACCAG
CACGACGTGG ACCAGTACCG CCTGGCACGG GCGCTGGACG CACGCGTGGA GGACTGCGTG
AACGCGGTTG GCGTGTACGT GAACACCGCT TCGGCCGCGC TGCTGTCGCG GGTGTCCGGC
CTGTCGGCCA CGGTGGCCGA GAACATCGTG CGCCATCGTG ACGACAACGG CCCGTTCAAG
CGCCGCAAGG ACCTGCTGAA GGTGTCGCGG CTGGGCGAGA AAACCTTCGA GCAGTGCGCC
GGCTTCCTGC GCATCGCCGA TGGCGACGAA CCGCTGGACG CGTCGGCGGT GCACCCGGAA
GCCTACCCGG TGGTCGAGCG CATCGTGGCC AGCACCGCGC GCCCGATCAA GGCGCTGATC
GGCGATGGCA GCTTCCTGCG TGGACTGAAG GCCGAGCAGT TCACCGACGC GACCTTCGGT
GTTCCGACCG TGCGCGACAT CCTCAAGGAA ATGGAAAAGC CGGGCCGTGA CCCGCGTCCG
GAGTTCAAGG CGGCGCGCTT CGCCGAGGGC GTCGAGGACA TCAAGGATCT GCGCGAGGGC
ATGGTGCTGG AGGGCGTGGT CAGCAACGTC GCGGCCTTCG GCGCCTTTGT CGATATCGGC
GTGCACCAGG ACGGCCTGAT CCACATTTCG GCGCTCTCCG ATACGTTCGT GAAGGATCCG
CGCGACGTGG TCAAGGCCGG CGATATCGTC AAGGTGAAGG TGCTGGAGGT GGACGTGGCG
CGCAAGCGCA TCGCCCTGAC CCGACGCCTG GACGACACCC CCGGCCAGGC CACCAGCCGC
CCGGGCCAGC GCGACGAACG TAGTCAGGGC CAGGGGCCGC GTCGTGACGC AGGTGGCCAG
AACCGTGGCC CCAACCGCAG CCCGGGCAAT GGCGGCCGCG GCGGCCAGTC GGCGGCGCCG
GCCAACAATG CCCTGGCAGA AGCCTTCGCC CGCGCCAAGC GCAGCTGA
|
|---|
| Protein sequence | MHDAKNAQSA LAQQIAQTIA DEIGAQSTQV RAAVGLLDEG ASVPFIARYR KEVTGGLDDT
QLRNLETRLT YLRELEDRRA AVLSSIGEQG KLSDELRNDI LAADTKSRLE DLYLPYKPKR
RTRAQIAREA GLEPLADGLL NDPTRDPQVF AAGFVDTDKG VADTKAALEG ARAILMERWG
EDAALVGELR TWLGETGVIR ARVAEGKETE GAKYRDYFEH AEALAKIPSH RLLALFRARR
EEILFLELDP GSDAEAGHQY AEGRVARKAG IADQGRAGDR WLLDACRLTW RAKLHTHLLL
DLFNQAREKA EAEAIAVFGD NLKDLLLAAP AGPKTVLGLD PGIRTGCKIA VVDATGKLVA
TETIYPHEPR RQWEQSLQTI KQLCAKHNVE LIAIGNGTAS RETDKLAGEA IKAAANPKLQ
KVVVSEAGAS VYSASEFAAK EFPGLDVSLR GAVSIARRLQ DPLAELVKIE PKAIGVGQYQ
HDVDQYRLAR ALDARVEDCV NAVGVYVNTA SAALLSRVSG LSATVAENIV RHRDDNGPFK
RRKDLLKVSR LGEKTFEQCA GFLRIADGDE PLDASAVHPE AYPVVERIVA STARPIKALI
GDGSFLRGLK AEQFTDATFG VPTVRDILKE MEKPGRDPRP EFKAARFAEG VEDIKDLREG
MVLEGVVSNV AAFGAFVDIG VHQDGLIHIS ALSDTFVKDP RDVVKAGDIV KVKVLEVDVA
RKRIALTRRL DDTPGQATSR PGQRDERSQG QGPRRDAGGQ NRGPNRSPGN GGRGGQSAAP
ANNALAEAFA RAKRS
|
|---|
| |