Gene Smal_2379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2379 
Symbol 
ID6476862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2675850 
End bp2677259 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content70% 
IMG OID642731560 
ProductDNA repair nucleotidyltransferase/DNA polymerase-like protein 
Protein accessionYP_002028765 
Protein GI194366155 
COG category[L] Replication, recombination and repair 
COG ID[COG0389] Nucleotidyltransferase/DNA polymerase involved in DNA repair 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.286987 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATTGGG CCTGCCTGTT GTTGCCGCAG CTGGCACTGG ACAGCGTGCT GCGCCTGCAG 
CCGGACCCGC AGCGGCCACT GGTGCTGCTG CAGGGGCCGG CACAGCGTCG CGTACTGCGT
GCGGTCAGCC CATCGGCACG CGCAGCGGGG CTGCGCCCGG GCATGCTGCT GTCGGCTGCG
CAGGTGCTGG TGCAGGACAT GCACCTGCAC GACTACGACC CGAACGCCGA ACAGCACACC
CGGCAGCTGC TGGCCAGTTG GGCCTACGCC TACAGCTCGC AGGTCAGCCT CGATTTTCCG
CACGCGCTGG TCATGGAGAT CGGCGCCAGT CGCGCCCTGT TCGGTGACTG GCTGACGATC
GAAAAGCGCC TACGCAACGA ACTGCATGAA CTCGGTTTCC GCCACCGCCT GGTGGCCGCG
CCCACCGCGC ATGCCGCGCG CGTGCTGGCC AACGTCCACG ACGGCCTCGG CATCGATGCG
CAGCAGCTGC CAGCGGCACT GGCGCAGTTG CCATTGCCGC GCTGTGGCCT GCCCAGCGAA
GCGGTGACCG TGCTCGGTCG TTCCGGTCTG CGCACGCTGG GTGCGGTGCT CGAACTGCCG
CGCGACAGCC TGGCCCGGCG CTTCTCACCC GAGGTGCTGC AGCAACTGGA TGCGCTGCGC
GGCCTGCCCA CCGCGCCACT GCGCTACTAC CAGCCACCGG ATCGTTTCGA TGCGCGCATC
GAATTCGAAT ACGAGATCGA ATCCAGCCAG GCCCTGCTGT TCCCGCTGCG TCGCCTGCTG
CTGGACCTGG CTGCGTTCCT GTGTTCGCGC GATGGCGGCG TGCAGCGCTT CGACCTGCAT
TTCGAGCATG ACCTGCTGCC GGCCAGCGTG CTGACCATCG GCCTGCTGGC ACCCGAGCGC
GATCCCGCGC TGCTGTTCGA GATCGCACGC AACCGCATGG AAGCCTTCGC CCTGCCGGCC
GGCAGCCGCG CACTGCGCCT GCAGGCCGAG CAACTGCCAC CGTTCGTGCC CGCAGCGCGT
GACCTGTTCG ATACCCGGCC GGCGCAGGCG ATGCCTTGGA ACCAGCTGCG CGAGCGCCTG
CGCGCTCGGC TCGGCGATGA CGCCGTGCAG CCGCTGGCGG TGCAGGCCGA CCACCGCCCC
GAGCGCGCCA GCGGCACCCA GCCTGCGGCC AAGCCACCGG CATACTGGCC ACTGCGCCCC
GGTTGGCTGC TGGATACCCC ACAACCGCTG CGTGATCCGC GCCTGCGCAT CGTCACCGGG
CCGGAGCGGA TCGAATCGGG CTGGTGGGAC CAGGCCGATG CGCGCCGCGA TTACTACGTG
GTGGAAACCG CGCATGGCCA GCGCGGCTGG GCTTTCCGTG ACCGCAATGA TCCGCATGCG
CCGTGGATGC TGCACGGCTG GTTCGGCTGA
 
Protein sequence
MHWACLLLPQ LALDSVLRLQ PDPQRPLVLL QGPAQRRVLR AVSPSARAAG LRPGMLLSAA 
QVLVQDMHLH DYDPNAEQHT RQLLASWAYA YSSQVSLDFP HALVMEIGAS RALFGDWLTI
EKRLRNELHE LGFRHRLVAA PTAHAARVLA NVHDGLGIDA QQLPAALAQL PLPRCGLPSE
AVTVLGRSGL RTLGAVLELP RDSLARRFSP EVLQQLDALR GLPTAPLRYY QPPDRFDARI
EFEYEIESSQ ALLFPLRRLL LDLAAFLCSR DGGVQRFDLH FEHDLLPASV LTIGLLAPER
DPALLFEIAR NRMEAFALPA GSRALRLQAE QLPPFVPAAR DLFDTRPAQA MPWNQLRERL
RARLGDDAVQ PLAVQADHRP ERASGTQPAA KPPAYWPLRP GWLLDTPQPL RDPRLRIVTG
PERIESGWWD QADARRDYYV VETAHGQRGW AFRDRNDPHA PWMLHGWFG