| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2342 |
|---|
| Symbol | |
|---|
| ID | 6476825 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2634164 |
|---|
| End bp | 2634886 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642731523 |
|---|
| Product | two component transcriptional regulator, LytTR family |
|---|
| Protein accession | YP_002028728 |
|---|
| Protein GI | 194366118 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.0697143 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGACGCGTC CGCTGAGCGT GCTGCTGGTG GATGACGTGG CGCTGGCACG TGACCGCCTG
CGCCAGTTGC TGGCGGGCAT TCCGCAGGTC AGGGTCGATG CTGAAGCCGC CACCCTCGCG
CAGGCACGCG AGCAGCTTCA GGGGCGCCGT TTCGATCTGC TGCTGCTGGA TCTGGTCCTG
CCCGACGGTC GTGGCTGGGA GTTGCCCCAG CAGCAGCCGG CGCTGGCCGC GCACACCATC
TTCGTGACCG CGCTGCCGCA GCATGCGCTG CGCGCGTTCG AACTGGGCGT CGCAGACTAT
CTGCTCAAGC CGGTGGCAGC GCAGCGGTTG CGTGAAGCGA TCGAGCGCGT GCGCCGCCTG
GCAGGCCTGG CACCGCGTAC GGAGGATGGT GCGCAGACCC TGGCGGTGCC TGGTAGTGGT
GGTGTCCAGT ATGTACCGCT GGCGGAGATC GACTACATCG ACATGGCCGG TCATTACGCA
TGCGTGCACG TGGGGCAGCG ACTGCACCTG CTGCGTGAGC CGCTGGCGCA GCTGGCCGAA
CGGCTGGCGG ATGGAGGACT GTTGCGCGTG CACCGCTCGG CGCTGGTCAA CCCGCTGCGG
GTGCGATCAC TGATCGAGCG CCACAACGGT GATGCGCTGC TTGAACTGGC CGATGGCGTG
CAGCTGCCGG TGAGCCGCAG CTACCGGCCG GTGCTGGAGG CGGCCTTGGC GGCACGCGCC
TGA
|
|---|
| Protein sequence | MTRPLSVLLV DDVALARDRL RQLLAGIPQV RVDAEAATLA QAREQLQGRR FDLLLLDLVL
PDGRGWELPQ QQPALAAHTI FVTALPQHAL RAFELGVADY LLKPVAAQRL REAIERVRRL
AGLAPRTEDG AQTLAVPGSG GVQYVPLAEI DYIDMAGHYA CVHVGQRLHL LREPLAQLAE
RLADGGLLRV HRSALVNPLR VRSLIERHNG DALLELADGV QLPVSRSYRP VLEAALAARA
|
|---|
| |