Gene Smal_2339 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2339 
Symbol 
ID6476822 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2628836 
End bp2631865 
Gene Length3030 bp 
Protein Length1009 aa 
Translation table11 
GC content69% 
IMG OID642731520 
Producthistidine kinase 
Protein accessionYP_002028725 
Protein GI194366115 
COG category[T] Signal transduction mechanisms 
COG ID[COG4585] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGCCA TGCATGGCCG CCCCTTCCCG TTCCTGCGTC GCCTGCCGAC GCTGCTGACG 
TGCCTGCTGT TGTGGACCGC CCTGCCCGCC TTCGCCGTGC AGCGGCCAGC CGTGAACAGT
GGATTGACCG GCTACGAGCA CACCGCGTGG CGGGTCGGCC AGGGCGCACC CGGTGACATC
TGGGACATCA GCCAGGACCG CGACGGTCTG TTGTGGCTGG CTACCGGTTC GGGCCTGTAC
CGTTTCGATG GACGCCGCTT CGAACGGCAG GCGCCCCCCG TTGGCGGCCA GTTCCCGTCC
ACCAACATGG TCACGCTGGC GCATGCCGCC GACGGTGCCC TGTGGATCGG TTACTTCCAG
GCAGGCATCA GCCAGTTCGC GCGCGGCCAG CTGCACAACT ACGGCCGCGA CCAGGGCGTG
CCGGTCGGCG TGGTCCCACA CTTCAGCCAG GACCGCGACG GCCGACTGTG GGCGGCCATC
AATGGTGGGC TACGCTGGTT TGACGGCCAG CGCTGGCAGC GGCTGCCCAC TGGCACGGGG
GTGCCGGAAC ACCGCGTGCA ATGGGCGCTG CATGACAGCC ACGGCACTTT CTGGGTGCTG
GCCGACCTGA AAATCTGGAA GCGTGCCGCC GGCGCCACAC GCTTCGAGGA CACTGGCATT
GCGGTCTCGC AGATGGCGAC GCTGGCCGAG AGCCCGCAGG GCGACGTCTG GCTGGCCGAT
CGCGTACGCG GTGCTTCGCC GCTGGCCAAC GCGCAGGGCC TGCTGCCGGA CAGCGAACGC
GAAGCGCGAC GCCTCCCAGA CCTGGTCGCC GCACGCCTGC AGTTCACTGC CGACGGCGCG
CTGTGGGCCA CGATGAGCCC GCATGGCGGT GTGGCCCGGA TCACGTTCGA CGGCGATCGC
GCCGTGCGCA TGGAGCGTTT CGATTCGCCG CACGGGCTGA CCGCCACCTC GGCGGTGCCG
ATCATCGTCG ACCGCGAAGG CAATCTCTGG GTCGGCACCA ACCTGGGCCT CAACCGCTTC
CGTGCGCGCA GCGTGCACAC GCTGGCGGTG GGGCCCAGTG ATCCCTACCG CTCGCTGGTG
CGGGCCAGCG ATGGACGTGT GTACGGCTAT GGCGAGGACC TCAAGCCGTA CGATCTGCGC
CGGCCGTTGC TGGAAGGCAG TGCCGCACAA CTGCAGGTGG CCGCGCGCCG GGCACCCACG
CCAATCTGGC AGTTCGATTG GATCAACCTC GCGCGCACGG TCGAAGGTCG CACCACGCTG
ATTCCACTGC CCGCGCCGTT CACCGGGCAA CCGCTGCATG CCCTGCTGTT CCCCGACGAC
AACCAAGCCT GGGTCTGCAG TGGCGAACGC GGCGTGCTGC ATTACCTGCA CGGCCAGTGG
CAGCGCGAAA CGCGCCTGCC CGAACTGGCC TGCTCATCGC TGGCGCTGGA TGCCAATGGC
CAGCTGCTGC TCGGCTATGC CGACGGCCGG CTGCGCAGCA TGAGCGCGAC CCGCGTCAAG
GCTGTCGATG CCAGCCACGG GCTGTCGGTC GGGCCGGTCA CCGCGCTGCT GCACCACCAG
GACCTGTTGC TGGTGGCCGG TGAGGCTGGA CTGGCCGCTC GCCTCGGCAA CGGCCGCTTC
ATGCCGGTCA ACACTGACAT GGCCGGCGTG CTGGAGGGCA TCACTGGCAT GGTCGCCGAT
GCACACGGGC ACCTGTGGCT CAACGGCAGT CGTGGCCTGG TCCGCCTTGG GAGCGATCAG
CTGCGACGGG CGCTGCGTAC CGGGCAGCCG GTGACGCCAC GCCTGTTCGA TGCGGTGGAT
GGCATGCCGG GCATCGCCCT GCAGAGCGGA CCGATCGCCA CCGCTGCACT GGCCGATGAC
GGACTGCTGT GGCTGGCGAC CAACCAGGGC TTGGCCTGGC TGGATACCAC GCACTCGCAT
ATCAACACCA CGGCGCCCAG CGTACGCATC GGCGAAGTGC TGTACGGCAG TGAGCACCAA
CCACTGCGTG ACGGCCTGCG CCTGCCCGCT GGCACCAGCC AGCTGCAGAT CGACTACGTG
GCGTTGTCGC TGGCGCGTCC GGAGCGCAAC CGCTACCGCT ATCGACTGTC CGGCGTCGAC
GACGGTTGGC AGGATGCCGG CAGCAGCACG CGGGCGTACT ACACCAACCT GGCACCCGGC
AGTTACCGCT TCGAGGTGGA AGCCGCCAAC GAAGACGGCA TCTGGAGCAC TGCACCGGCC
AGCCGCAGCT TCCGCATCGC GCCCACCTTC ATGCAGACCG TCTGGTTCAA GCTGTTGTGC
GCGGCGGCAA TCCTGGCGCT GCTGGTTCTG GCAGTGCGCA TCCGCAGCGG GCAGCTGGCC
GCCCTGTTCC GCGCACGCCT GCAGGAACGA CATGGCGAAC GCGAGCGCAT TGCCCGCGAC
CTGCACGATA CCCTGCTGCA GGGCAGCCAG GGCCTGATCC TTCGCCTGCA TGCGATCAGC
CAGTCGCCAC AGACATCCGA AACGGTGCGC GGCCAGCTGG AATCGGCAAT GCAGCTTGCC
GAGCGCAACC TGGCCGAGGG CCGCGAGCGG GTCAATGCAC TGCGCGATGG CCCATTCGCC
GGGCGCGACC TGGCCTCGGT ACTGGCCGAC GTGCATGCCG AGTACGCCGG CCAGGGCACC
AATCCGCTAC GCCTGACCGT GGAAGGTGCG CCGCCACCGC TGCAGGCCGA CGCCGCCGAG
GAAGTGTTCC TGATCGGCCG CGAAGCAATC CGCAACGCAT TGCGTCACGC CGATGCCCGT
GCCATCGAGG TGGAGCTGTC CTACGGAGCG CGCTGCTTCC TGCTGCATGT GCGCGACGAT
GGCGTCGGCA TTGCCGACGA GAACGCCGCC CGTGGCCACT GGGGCCTGCA GGGCATGCGT
GAGCGCGCGC AGCGCCTCGG CGCGGACCTG CAGTTGTGGA CCCGCCCCGG CCTGGGCACC
GAGGTGGCGT TGTCGGTTCC CGCGCGGCGC CTGTATCACC GCGGCCCATC GCGTTGGCGC
TGGCCCTGGA GTAAAGCAAA CCATGACTGA
 
Protein sequence
MRAMHGRPFP FLRRLPTLLT CLLLWTALPA FAVQRPAVNS GLTGYEHTAW RVGQGAPGDI 
WDISQDRDGL LWLATGSGLY RFDGRRFERQ APPVGGQFPS TNMVTLAHAA DGALWIGYFQ
AGISQFARGQ LHNYGRDQGV PVGVVPHFSQ DRDGRLWAAI NGGLRWFDGQ RWQRLPTGTG
VPEHRVQWAL HDSHGTFWVL ADLKIWKRAA GATRFEDTGI AVSQMATLAE SPQGDVWLAD
RVRGASPLAN AQGLLPDSER EARRLPDLVA ARLQFTADGA LWATMSPHGG VARITFDGDR
AVRMERFDSP HGLTATSAVP IIVDREGNLW VGTNLGLNRF RARSVHTLAV GPSDPYRSLV
RASDGRVYGY GEDLKPYDLR RPLLEGSAAQ LQVAARRAPT PIWQFDWINL ARTVEGRTTL
IPLPAPFTGQ PLHALLFPDD NQAWVCSGER GVLHYLHGQW QRETRLPELA CSSLALDANG
QLLLGYADGR LRSMSATRVK AVDASHGLSV GPVTALLHHQ DLLLVAGEAG LAARLGNGRF
MPVNTDMAGV LEGITGMVAD AHGHLWLNGS RGLVRLGSDQ LRRALRTGQP VTPRLFDAVD
GMPGIALQSG PIATAALADD GLLWLATNQG LAWLDTTHSH INTTAPSVRI GEVLYGSEHQ
PLRDGLRLPA GTSQLQIDYV ALSLARPERN RYRYRLSGVD DGWQDAGSST RAYYTNLAPG
SYRFEVEAAN EDGIWSTAPA SRSFRIAPTF MQTVWFKLLC AAAILALLVL AVRIRSGQLA
ALFRARLQER HGERERIARD LHDTLLQGSQ GLILRLHAIS QSPQTSETVR GQLESAMQLA
ERNLAEGRER VNALRDGPFA GRDLASVLAD VHAEYAGQGT NPLRLTVEGA PPPLQADAAE
EVFLIGREAI RNALRHADAR AIEVELSYGA RCFLLHVRDD GVGIADENAA RGHWGLQGMR
ERAQRLGADL QLWTRPGLGT EVALSVPARR LYHRGPSRWR WPWSKANHD