Gene Smal_2334 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2334 
Symbol 
ID6476817 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2624865 
End bp2626835 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content66% 
IMG OID642731515 
ProductAmidohydrolase 3 
Protein accessionYP_002028720 
Protein GI194366110 
COG category[R] General function prediction only 
COG ID[COG1574] Predicted metal-dependent hydrolase with the TIM-barrel fold 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCACG ATCCACTCGA CCACGGTCGC CGCAACGTGG TGCTGGCCAG CGGCGCCGCC 
GTTGCACTTG GTTTGGCCGG CCGCGCCGGT GCTGCACTCG ATTCCACTTC CAAGGAGCGT
CGCATGAGCA CGCTGGTCAT CCGCAATGCC CGCATCACTA CGTTGGACCC GCAACAGCCG
CATGCGCAGG CCTTGGCCGT GCAGGAAGGG CGCATCGTCG CCGTCGGCAG TGACGAGGAG
ATCATGCGCG GCTGGGGCAA CGAAGCGACC CTGATCGATG CGCAGGGGCG GCGCCTGTTG
CCCGGCCTCA ACGACAGCCA TACCCATCTG ATCCGCGGTG GGTTGAACTA CAACCTTGAA
CTGCGCTGGG ACGGCCTGCG TTCGCTGGGG GACGCGCTGG ACATGCTGAA GGCGCAGGTC
GACCGCACGC CTGCACCGCA GTGGGTGCGT GTGGTCGGTG GATTCACCGC CACCCAGTTC
AACGAGAAGC GCCTGCCGAC ACTGCAGGAG CTCAACGACA TCGCGCCGGA TACGCCGGTG
TTCCTGCTGC ACCTGTACGA CCGTGCGCTG CTCAACCGCG CCGCACTGCG TGCCTGTGGC
TATACCAAGG ACACCCCGGA TCCGCCGGGC GGCCAGATCG TGCGTGACTC GCTCGGCAAT
CCGACCGGGC TGCTGCTGGC CAAGCCCAAT GCGCTGATCC TGTACGCGAC CCTGGCCAAG
GGCCCGAAGC TGCCGATCGA GTACCAGGCC AATTCCACCC GTCATTTCAT GCGTGAGTTG
AACCGTCTCG GCATCACCTC GGTGATCGAC GCCGGCGGTG GTTTCCAGAA CTACCCCGAG
GACTACCAGG TCATCGAGCA GCTGCACCGC GATGACCAGC TAACGGTGCG CATCGCCTAT
AACCTGTTCA CCCAGAACAA GGGCAACGAG GTCAACGACT TCCGAGGCTG GAGCGAGATG
CTGCAGCCAC GCCAGGGCGA TGACCTGCTG CGCCACAATG GTGCCGGTGA GATGCTGGTG
TTCTCCGCCG CCGACTTCGA GTTGTTCAAC GAACCGCGTC CGGAACTGCC GCCGGAGCTG
GAGCCGGAAT TGCACGATGT GGTGAAGCTG CTGGTCGAGA AGCGCTGGCC GTTCCGCATC
CATGCCACCT ACGACGAGAG CATCACCCGC ATCCTGGACG TGTACGAGCA GGTCAACCGC
GAGGTGCCGT TCGATGGCCT GCACTGGTTC ATCGATCACG CCGAGACCAT CACCCCGCGC
AACATCGAAC GCATCCGTGC GCTGGGTGGC GGCATTGCCG TGCAGCACCG CATGGCCTAC
CAGGGCGAAG CCTTCGTCGA GCGCTATGGC GTGCAGGCCG CGCGGCATAC ACCGCCGGTC
AAGCGCATGC TGGCCGAAGG CGTACCGGTC GGTGCCGGTA CCGACGCCAC CCGCGTGGCC
AGCTACAACC CGTGGGTGGC GTTGTCCTGG CTGGTGACCG GGCGCACCGT GGGCGGTCTG
GCCCTGTATG GCGATGAGAA CCTGCTCGAA CGCGAGCAGG CGCTGCGCCT GTGGACCCAG
GGCAGCGCCT GGTTCTCCGG CGACGAAGCG GTGAAGGGCA CGCTGAAAGC CGGTCAGCTG
GCTGATTTCA TCCTGCTCTC GGCCGACTTC TTCCGCGTGG ATGACGCGCA GATCGCCGAC
ATCACCAGCG TGCTGACCGT GGTCGGCGGA CGCATCGTGC ATGCAGATGC CGACTATGCA
GGGCTGGCGC CGCAGCTGCC GCCGGCGATG CCGGACTGGT CGCCGGTCAA CCGGTTCGGT
GGCTACCACG TCGGCGGCGC CGCAACCGGT CTGGCGGCCG CGCACCGCCA TCATCATGGT
GCGGCCTGCA GTACCCACGG CGCGCATGGC CATGCTGCCC GGCATGCTGC ACCCACTGAC
GACCTGACCG CGTTCTGGGG CGCGATGGGA TGCTCGTGCT TCGCGTTCTG A
 
Protein sequence
MSHDPLDHGR RNVVLASGAA VALGLAGRAG AALDSTSKER RMSTLVIRNA RITTLDPQQP 
HAQALAVQEG RIVAVGSDEE IMRGWGNEAT LIDAQGRRLL PGLNDSHTHL IRGGLNYNLE
LRWDGLRSLG DALDMLKAQV DRTPAPQWVR VVGGFTATQF NEKRLPTLQE LNDIAPDTPV
FLLHLYDRAL LNRAALRACG YTKDTPDPPG GQIVRDSLGN PTGLLLAKPN ALILYATLAK
GPKLPIEYQA NSTRHFMREL NRLGITSVID AGGGFQNYPE DYQVIEQLHR DDQLTVRIAY
NLFTQNKGNE VNDFRGWSEM LQPRQGDDLL RHNGAGEMLV FSAADFELFN EPRPELPPEL
EPELHDVVKL LVEKRWPFRI HATYDESITR ILDVYEQVNR EVPFDGLHWF IDHAETITPR
NIERIRALGG GIAVQHRMAY QGEAFVERYG VQAARHTPPV KRMLAEGVPV GAGTDATRVA
SYNPWVALSW LVTGRTVGGL ALYGDENLLE REQALRLWTQ GSAWFSGDEA VKGTLKAGQL
ADFILLSADF FRVDDAQIAD ITSVLTVVGG RIVHADADYA GLAPQLPPAM PDWSPVNRFG
GYHVGGAATG LAAAHRHHHG AACSTHGAHG HAARHAAPTD DLTAFWGAMG CSCFAF