Gene Smal_2317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2317 
Symbol 
ID6476800 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2607787 
End bp2607978 
Gene Length192 bp 
Protein Length63 aa 
Translation table11 
GC content58% 
IMG OID642731498 
ProductFlp/Fap pilin component 
Protein accessionYP_002028703 
Protein GI194366093 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3847] Flp pilus assembly protein, pilin Flp 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.728903 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.185858 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAT CGATCCGCAG GTTCCTGAAG GAAGAAGATG GCGTTACCGC ACTCGAGTAC 
GGCCTGCTGG CTGCTGTGAT TGCGGGTGTC CTGATCGCAC TGGGCAGCAC GCAGATCAAG
GATTTCTTCG AAACGCTCTT TGAGAATCTC ACCAAGCTTG CCGACAAGGC ATCGGGCACC
CCGCCGGCCT GA
 
Protein sequence
MNASIRRFLK EEDGVTALEY GLLAAVIAGV LIALGSTQIK DFFETLFENL TKLADKASGT 
PPA