| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2306 |
|---|
| Symbol | |
|---|
| ID | 6476789 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2591290 |
|---|
| End bp | 2592141 |
|---|
| Gene Length | 852 bp |
|---|
| Protein Length | 283 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 642731487 |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_002028692 |
|---|
| Protein GI | 194366082 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.16135 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.168565 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCCTACT CCCCTGAATC CCTGCAGGCC TTCGTGGAAG CTGCGGCGCT CGGCTCGTTC
TCGGCGGCGG CGCGACGCCT GCGCAAGACC CAGTCGACGG TCAGCACCGC CATCGCCCAC
CTGGAGGCCG ATCTGGGCGT GAGCCTGTTC GACCGCAGCG GGCGCTACCC GCAGCTGACC
GAGGCCGGGC GCCAGGTGCT GGGGCACGCG CAGGAAATCC TTGCCGCCGA TACCCGCCTG
CAGCAGTTGA GCGTGCGCCT GGCCGCACCG GTCGAACCGC GCCTGACCGT GGCGTTCTCC
GACGTCTACC AACTGGACCC GGAACAACGG GTGCTGCAAC GCTTCGCCGA GGCGTTCCCG
GAGATCGAGC TGGAATGGCT GGATGCCGAG GGCGAGGACG TGCTGGAACT GGTAAGCAAC
GGACGCGCCG CGCTGGGTCT GCTGCCACGG CAGGAGCACT ATCCGGACGG ACTGGTGGCA
CGGCCGCTGG CGCACCACAG CGAACTGTCA GTGTACGTGG CGCGCGAGCA TCCGCTGGCC
AGCGCTGGCC GTCGCGCCGC CGCGCAGCTG GCGCGGCACC GGCAGGTGCG CCTGAGCGCG
GAAGTCGATC AATCCCGCGT GGTCACCGGC CTGGCCTGGA CCGCCACCGA CTACCTGATG
GTGATGGAGA TGGCCGAGGA CGGCCTCGGC TGGGCCGAGC TGCCGCGGGC GCTGGTGCAG
CGCTATGACC GTGGCCGGCT GGTGGAACTG GTGCTGCCCG GCTGGCCGCG GCGCATCCAC
AGCGACCTGC TGTGGCGCCG TGATACGCCG CCGGGACCGG CCGCACTCTG GTGGGCCGAC
GCATTGGGGT GA
|
|---|
| Protein sequence | MPYSPESLQA FVEAAALGSF SAAARRLRKT QSTVSTAIAH LEADLGVSLF DRSGRYPQLT
EAGRQVLGHA QEILAADTRL QQLSVRLAAP VEPRLTVAFS DVYQLDPEQR VLQRFAEAFP
EIELEWLDAE GEDVLELVSN GRAALGLLPR QEHYPDGLVA RPLAHHSELS VYVAREHPLA
SAGRRAAAQL ARHRQVRLSA EVDQSRVVTG LAWTATDYLM VMEMAEDGLG WAELPRALVQ
RYDRGRLVEL VLPGWPRRIH SDLLWRRDTP PGPAALWWAD ALG
|
|---|
| |