| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2299 |
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| Symbol | |
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| ID | 6476712 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2583132 |
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| End bp | 2585111 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642731480 |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_002028685 |
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| Protein GI | 194366075 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1292] Choline-glycine betaine transporter |
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| TIGRFAM ID | [TIGR00842] choline/carnitine/betaine transport |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.944514 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.189875 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAGTAC TGGAGCCGCA ACAATCCCCG GTGCGCACTC TTCGACCTGT GTTCGCCTTC
GCGGCGATCG TTGTCGTGGC GTTCGCGCTG TTTGTCAGCC TGTTCCCGCT CGGTGCGGGC
CGCCTTCTGG TCAAGGCGCA GGACTGGGCC GCACTCAATG TCGGCTGGTA CTACCTGCTG
GCGATGACCC TCTACCTGGT GTTCGTGGTC GGCGTGGCGC TGTCCAAGTA CGGTGGCATC
AAGCTCGGTG CCGACCATGA CGAGCCGGAG TTCAGCTATC TCTCCTGGGC CGGCATGCTG
TTCGCCGCCG GCATCAGCAT CACCCTGTTC TTCTTCTGCG TCTCCGAACC GCTGACCCAT
TACCTGCAGC CGCCACAGGG CGATCCGGCG GCCGGTGAGG CCGGCGCGCG CCAGGCCATG
CAGCTGCTGT TCCTGCACTG GGGCCTGCAC GGTTGGGGCG TGTTCGCACT CGCTGCGATG
GCGATGGCCT ACTTCGCCTA CCGCCACAAC CTGCCGCTGG CCCTGCGTTC GGCGCTGTAC
CCGCTGATCG GCAAGCGCAT CAATGGCCCG ATCGGCTACA CCGTGGACGC GCTGGGCATT
GTCGCCACCG TGTTCGGCAT CGGCGCCGAC ATGGGCTTCG GCGTGCTGCA CCTCAACGCC
GGCCTGTCGC ACCTGTTCAA CATCCCGCAC TCCAACCTGG TGCAGATCAT CCTGGTGGTC
AGCATGATGG GCGCGGCGGT GGCTGTGGCC GTTTCAGGCG TGGAGAAGGG CGTGCGCTGG
ATGGCCAACA TCAACATGCT GCTGGCGATC GCGCTGGTGC TGTTCATGCT GTGCGCCGGC
CCCACCCAGT ATCTGCTCAG CACGCTGATG CAGAACCTGG GCGACTACCT CGGCAGCGTG
GTCGGCAAGA GTTTCGATGT GTACGCCTAT GGCGGCCGAC CGGAATGGCT GGGCGGCTGG
ACGGTGTTCT ACTGGGCCTG GTGGATCGGC TGGGCGCCGT TCGTCGGCCT GTTCATCGCC
CGCATCTCGC GTGGCCGCAC CATCCGCGAA TTCGTGTTCG GCGTCCTGCT GATCCCGCTC
GGCTTCACCT TGGCGTGGCT GTCGATCTTC GGCAACAGTG CACTGGACCA GGTGCTGCAC
CATGGCCAGC AGCAACTGGC GCAACTGGCA GTGGATGATC CACCCACTGT GCTGTACGCG
CTGCTGGACG GCTACCCGTG GAGCAAGGCA GTGATCGCGG TGACGGTGTT CGTCAGTTTC
ATTTTCTTCG TGACATCGGC TGACTCCGGC GCGGTGGTGC TGTCCACGTT GTCCTCGCAT
GGCGGGGCGC CGGAGGATGA TGGTCCGCGT TGGCTGCGCG TGTTCTGGGG CACGGTCATC
GCGGTGCTGA CCGCCGGGTT GCTGCTGGCC GGCAGCATCG ATGCGCTGAA ATCGGCAGTG
GTGCTGGCGT CGCTGCCGTT CTCGGCGGTG TTGTTGCTGA TGATGTGGGG CCTGACCCGC
GCCTTCAGTG ACGAGTCGCA CCGCAAGCGC GCGCTGCAGT ACCGTCCCTC GCCGCTGATC
GGTGACGACC GCCACCACCA GGGCTGGCGC CAGCGCCTGA GCCAGGCCAT GCACTTCCCG
GTGCGCGACC AGGTCTACCG CTTCATGGAT GACACGGTGA AGCCGGCGAT GGAAGCGGTG
GCCGAACAGC TGCGCGGGCA GGGCTGGGAT GTGGCGACGC GCTTCGAGGC CGGCGACATG
GAGTTGACGG TGAACCACGG CGAGCAGCAG GACTTCCTGT ACCGGGTGAT CCTGAGTGGC
TACCTGACGC CGTCGTTCGC CGCACAGCAG CTGCGCAACC AGCGCTACTA CCGCGCCGAA
GTGCATCTGT ACGAAGGCAG CCAGGACTAC GACCTGGTCG GCTACAGCCG CAAGCAGATC
ATCAACGACA TCATCAGCCA GTACGAACGG CACCTGCAGT TCCTGCACCT GAGCCGTTGA
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| Protein sequence | MEVLEPQQSP VRTLRPVFAF AAIVVVAFAL FVSLFPLGAG RLLVKAQDWA ALNVGWYYLL
AMTLYLVFVV GVALSKYGGI KLGADHDEPE FSYLSWAGML FAAGISITLF FFCVSEPLTH
YLQPPQGDPA AGEAGARQAM QLLFLHWGLH GWGVFALAAM AMAYFAYRHN LPLALRSALY
PLIGKRINGP IGYTVDALGI VATVFGIGAD MGFGVLHLNA GLSHLFNIPH SNLVQIILVV
SMMGAAVAVA VSGVEKGVRW MANINMLLAI ALVLFMLCAG PTQYLLSTLM QNLGDYLGSV
VGKSFDVYAY GGRPEWLGGW TVFYWAWWIG WAPFVGLFIA RISRGRTIRE FVFGVLLIPL
GFTLAWLSIF GNSALDQVLH HGQQQLAQLA VDDPPTVLYA LLDGYPWSKA VIAVTVFVSF
IFFVTSADSG AVVLSTLSSH GGAPEDDGPR WLRVFWGTVI AVLTAGLLLA GSIDALKSAV
VLASLPFSAV LLLMMWGLTR AFSDESHRKR ALQYRPSPLI GDDRHHQGWR QRLSQAMHFP
VRDQVYRFMD DTVKPAMEAV AEQLRGQGWD VATRFEAGDM ELTVNHGEQQ DFLYRVILSG
YLTPSFAAQQ LRNQRYYRAE VHLYEGSQDY DLVGYSRKQI INDIISQYER HLQFLHLSR
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