Gene Smal_2281 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2281 
Symbol 
ID6476694 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2560274 
End bp2561788 
Gene Length1515 bp 
Protein Length504 aa 
Translation table11 
GC content71% 
IMG OID642731462 
ProductThioredoxin domain 
Protein accessionYP_002028667 
Protein GI194366057 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2143] Thioredoxin-related protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00640337 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCCGA TGCGCGTCGC GCTTTCCGTG TTGCTGCTGG CCTCGGCGCT GAGCGCCTGC 
ACCCCGGCCC CGGTATCCAC CGCCAACTCC GCCGAGGCAC CCGCGCCGGC GTCCGCCATC
GCCTGGCGCC AGGGCGATGT GGACGATGCC TTCGCCGAAG CCGCCGACAG CGGCAAGCCG
GTGCTGCTGT ACTGGGGCGC GGTCTGGTGC CCGCCGTGCA ACCAGCTCAA GGCGGGCCTG
TTCAAGGACC CGGCTTTCAT CGCGCTGACC AGCAAGTTCG TGCCGGTCTA CCTGGATGGC
GACGAGGAAG GCGCGCAGGC CTGGGGCGAA CGCTTCGGCG TGCGCGGCTA TCCCACGCTG
ATCGTGCTGG ACCCACAGCG CAACGAAATC ACCCGCGTGG CTGGCGGCAA TGACGCCGCC
GAACTGACCC GGGCCCTGAC CGTCGCTGCA GGCCGCCGCA GTGCTGTTGC CGCCACCTTG
GCCACCGCGC TGGCAACGCC GGACCGGCTG GCCGCCGAAG ACTGGCAGGT GCTGGGCGAC
TACGGCTGGG AAGTGGACGC CAACCGCCTG GCCGGCGAGC GCAGGAGCCA GGATGTGCTG
CGCCAGTTGT CCAAGGCCGC ACCGGACGCC GCCCTGCAGC GCCGCTTCGC TCTGCTTGCC
TTGGCAACGG CCGAAAAGCC CGATGCCTCA CCCGTGCGCG AGCTGCTGCA GGCGGTGCTG
GCGCAACCGG CGGAAGTGCG CCGCAACCGT GAGCTGCTGG GCTATGCGGG CGTGCAGCTG
GTCAAGCAGG CCAGTGCCGG GCCGGCCACC AGCAACACGC TGGGACGGCA GCTGCTGGTC
GCACTGGAGC GCGCAGATGC CGAGCGCGGT GATCGCGCCG ACGACGCGTT GTCGCGTGCG
CTGACCGAAG TGTCGCTGGC CCGCCAGCAG CAGCCGAAGG GCGCACTGCC CCCGGCCCTG
GTTGAGCGGG TCAAGCAGCG CGTGGGCGCT GCCGATGCCG CCGCCACCGA TGCGCATGCA
CGCCAGGCCA CGATCAGCAG CGCGGTGTAC GCATTGCGCG AGGTAGGTGA CGACGCGGGT
GCCGAGGCAC TGTTGCTGGC CGAGCTGAAG CGCAGCGAGC AGCCGTACTA CTACATGCCC
GAGCTGGCCG AACTGGCCGA GCAGCGCGGC GACGCCGCCG GCGCGCTGGA GTGGTTGAAG
CGCGCCTACG ATGGTGCACA GGGCCCGGCC ACCCGCGTGC AATGGGGCGT GCTGTACGTG
GAAGGTCTGC TGAAGCTGGC GCCGGACGAT GCACCGCGCA TCGAGCAGGC CACCGCGTCG
CTGATCGCCG AGCTGGAGGC ACAGCCGTCG GGTTACCACC AGCGTACCCG CCAGCGCTTC
GAGCGACTTG CCGGGCAGTT GAAGGCGTGG AGCGGCAAGC ATCAGGGTGC GGAGACGCTG
GCACGGCTGC AGCAGCGGAT GCAGCAGGCG TGCGGTGACC AGGTGGATGG CGCCTGTAAG
GACTGGTTGA GCTGA
 
Protein sequence
MLPMRVALSV LLLASALSAC TPAPVSTANS AEAPAPASAI AWRQGDVDDA FAEAADSGKP 
VLLYWGAVWC PPCNQLKAGL FKDPAFIALT SKFVPVYLDG DEEGAQAWGE RFGVRGYPTL
IVLDPQRNEI TRVAGGNDAA ELTRALTVAA GRRSAVAATL ATALATPDRL AAEDWQVLGD
YGWEVDANRL AGERRSQDVL RQLSKAAPDA ALQRRFALLA LATAEKPDAS PVRELLQAVL
AQPAEVRRNR ELLGYAGVQL VKQASAGPAT SNTLGRQLLV ALERADAERG DRADDALSRA
LTEVSLARQQ QPKGALPPAL VERVKQRVGA ADAAATDAHA RQATISSAVY ALREVGDDAG
AEALLLAELK RSEQPYYYMP ELAELAEQRG DAAGALEWLK RAYDGAQGPA TRVQWGVLYV
EGLLKLAPDD APRIEQATAS LIAELEAQPS GYHQRTRQRF ERLAGQLKAW SGKHQGAETL
ARLQQRMQQA CGDQVDGACK DWLS