Gene Smal_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2274 
Symbol 
ID6476687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2553413 
End bp2554048 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content68% 
IMG OID642731455 
ProductIsochorismatase 
Protein accessionYP_002028660 
Protein GI194366050 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1535] Isochorismate hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.412367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGCTGC CCCGCATCAC CAACTATTCC TTGCCGACCG CTGCCGAACT GCCGCAGGCG 
CGCGGGCCCT GGCGCCCGCA ACGCGATCGT GTCGCGCTGC TGGTACACGA CATGCAGCGC
TACTTCCTGG CCGCGTTCGA TGCCCGAAAC GCGCCGCTGC GGCCGGCGGT GGACAATATC
GTGCGCCTGC TGGCGCACTG CCGCGCGCAC GGCATTCCCG TGTTCTACAC CGCCCAGCAT
GGCGACCAGG ATCGCCGTGA CCGTGGCCTG CAGGCCGATC TGTGGGGGCC CGGAATGCGC
CGCAGCGCCG ACCATGAACC GATCATCGAG GCGCTGGCAC CGCAGCCGGG TGAGCACGTG
CTGGTGAAGC ACCGCTACAG CGCGTTCCAG CGCAGCAACC TGGAGACGCT GATGCGGGTG
CGTGGCCGCG ACCAGCTGCT GGTGACCGGC GTGTATGCGC ATATCGGTTG CACGGCCACC
GTGGTTGAAG CTTTCCAGCG TGATATCGAG GCGTTCATCG CCGCCGATGC GGTGGCGGAC
TTCTCGCGTG CCGATCACGA TCAGGCGCTG CACTGGATCG CACGCACCTG TGGCGTGCCG
ATGACCACCG ATCAGCTGCT GGAGGTGCTG CGATGA
 
Protein sequence
MALPRITNYS LPTAAELPQA RGPWRPQRDR VALLVHDMQR YFLAAFDARN APLRPAVDNI 
VRLLAHCRAH GIPVFYTAQH GDQDRRDRGL QADLWGPGMR RSADHEPIIE ALAPQPGEHV
LVKHRYSAFQ RSNLETLMRV RGRDQLLVTG VYAHIGCTAT VVEAFQRDIE AFIAADAVAD
FSRADHDQAL HWIARTCGVP MTTDQLLEVL R