Gene Smal_2271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2271 
Symbol 
ID6476684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2548523 
End bp2549281 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content69% 
IMG OID642731452 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_002028657 
Protein GI194366047 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0605944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTTGA CCGGCTTTGA AGGTCGCGTG GCACTGGTGA CCGGCGCCGC CGGCGGCATC 
GGCGAGGCCC TGGTACGGCT GTTGGCCGAG GCCGGCTGCA CGGTGGTGGC AACCGATCGC
GAGGCGCCCG TGGTCGCGGA TGCACGTGTG CAGGCGTTTG CCCTCGATGT GACCGACAGC
GCGGCGGTGG ATGCCTTGGT GGATCGCGTG GAAGCCAGCA TCGGGCCCAT TGGCCTTGCC
GCCAGTGTGG CGGGTGTTCT GCATGTGGGA GCTGTTGCGG AGACCACGGA TGCCGATTGG
CGCCGGGTGT TCGCAGTCAA CGCCGATGGC GTGTTCCATG TTGGGCGTGC GCTGGCGCGG
GTGATGTCAC CACGGCGACA GGGCGCGATC GTCGCCGTCA GTTCGAATGC CGCCGGCGTG
CCGCGGCACG GCATGGCTGC CTACGCCGCG TCCAAGGCTG CCGCCACGAT GTTCACCCGC
TGCCTCGGGT TGGAACTGGC GCCGCTGGGC ATCCGCTGCA ATATCGTCGC CCCGGGTTCA
ACGCTGACCC CGATGCAGAC CGGCATGTGG CAGGACGAGC ACGGTGCCGA GCGGGTGATT
GCCGGCAACC TGGAGACGTA CAAGGCCGGC ATCCCGCTGC GCAAGCTGGC CACCCCGGAA
GACATCGCGC ACTCGGTGAT GTTCCTGCTC TCCGAGCAGG CCGGGCACGT GGCGATGAGC
GACCTGTATG TGGACGGCGG CGCCACCCTG CGCGGGTGA
 
Protein sequence
MQLTGFEGRV ALVTGAAGGI GEALVRLLAE AGCTVVATDR EAPVVADARV QAFALDVTDS 
AAVDALVDRV EASIGPIGLA ASVAGVLHVG AVAETTDADW RRVFAVNADG VFHVGRALAR
VMSPRRQGAI VAVSSNAAGV PRHGMAAYAA SKAAATMFTR CLGLELAPLG IRCNIVAPGS
TLTPMQTGMW QDEHGAERVI AGNLETYKAG IPLRKLATPE DIAHSVMFLL SEQAGHVAMS
DLYVDGGATL RG