Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2271 |
Symbol | |
ID | 6476684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2548523 |
End bp | 2549281 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642731452 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_002028657 |
Protein GI | 194366047 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0605944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGTTGA CCGGCTTTGA AGGTCGCGTG GCACTGGTGA CCGGCGCCGC CGGCGGCATC GGCGAGGCCC TGGTACGGCT GTTGGCCGAG GCCGGCTGCA CGGTGGTGGC AACCGATCGC GAGGCGCCCG TGGTCGCGGA TGCACGTGTG CAGGCGTTTG CCCTCGATGT GACCGACAGC GCGGCGGTGG ATGCCTTGGT GGATCGCGTG GAAGCCAGCA TCGGGCCCAT TGGCCTTGCC GCCAGTGTGG CGGGTGTTCT GCATGTGGGA GCTGTTGCGG AGACCACGGA TGCCGATTGG CGCCGGGTGT TCGCAGTCAA CGCCGATGGC GTGTTCCATG TTGGGCGTGC GCTGGCGCGG GTGATGTCAC CACGGCGACA GGGCGCGATC GTCGCCGTCA GTTCGAATGC CGCCGGCGTG CCGCGGCACG GCATGGCTGC CTACGCCGCG TCCAAGGCTG CCGCCACGAT GTTCACCCGC TGCCTCGGGT TGGAACTGGC GCCGCTGGGC ATCCGCTGCA ATATCGTCGC CCCGGGTTCA ACGCTGACCC CGATGCAGAC CGGCATGTGG CAGGACGAGC ACGGTGCCGA GCGGGTGATT GCCGGCAACC TGGAGACGTA CAAGGCCGGC ATCCCGCTGC GCAAGCTGGC CACCCCGGAA GACATCGCGC ACTCGGTGAT GTTCCTGCTC TCCGAGCAGG CCGGGCACGT GGCGATGAGC GACCTGTATG TGGACGGCGG CGCCACCCTG CGCGGGTGA
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Protein sequence | MQLTGFEGRV ALVTGAAGGI GEALVRLLAE AGCTVVATDR EAPVVADARV QAFALDVTDS AAVDALVDRV EASIGPIGLA ASVAGVLHVG AVAETTDADW RRVFAVNADG VFHVGRALAR VMSPRRQGAI VAVSSNAAGV PRHGMAAYAA SKAAATMFTR CLGLELAPLG IRCNIVAPGS TLTPMQTGMW QDEHGAERVI AGNLETYKAG IPLRKLATPE DIAHSVMFLL SEQAGHVAMS DLYVDGGATL RG
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