Gene Smal_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2212 
Symbol 
ID6476543 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2490013 
End bp2490540 
Gene Length528 bp 
Protein Length175 aa 
Translation table11 
GC content69% 
IMG OID642731394 
Productputative type II secretion system protein 
Protein accessionYP_002028599 
Protein GI194365989 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG3149] Type II secretory pathway, component PulM 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGCCA GGACGCTGCG CCTGGGCGAA GGTCTGGCAG GCCTGCAGCT GCGCTGGCAG 
CGCCTGCCGC CGCGCGACCG GCTGATGCTG TGGGTGATGG TGGTGGCGCT GCTGGCGGCG
GGTCTGTGGA TGTTGTGGCT GGAGCCACTG CTGAAGCTGC GCACGCATTG GCAGGCCGAA
CTGCCACGGC TGCAGGCGCA GGCGCGCGTA TTGGCGCCGC TGCTGCACGC CCGCGAACGC
CAGCAACTGG CGCAGGGGCA TCAGCCGACG CTGGCTGGGC TGCGCGGACA GATCAAGACC
GCCGGCCTTG CCGACGGACT GCATATCGAC GCACGCGACG GGCGCTGGCA CCTGCAGGTG
CAGGCGGTGC CCGCTGACGC GCTGTGGAAC TGGCTGCTGC CCGTGCTGGC CGATCCGGCC
ATCGAACTGC AGCAGCTGCA ATTGACACGC ACAGGGGACG CGAACATGCC GGTGGCACGG
ATTTCCGGAA ACATCGTGAT GGCACCCACC GTGGGTGGCC GTCCATGA
 
Protein sequence
MTARTLRLGE GLAGLQLRWQ RLPPRDRLML WVMVVALLAA GLWMLWLEPL LKLRTHWQAE 
LPRLQAQARV LAPLLHARER QQLAQGHQPT LAGLRGQIKT AGLADGLHID ARDGRWHLQV
QAVPADALWN WLLPVLADPA IELQQLQLTR TGDANMPVAR ISGNIVMAPT VGGRP