| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2205 |
|---|
| Symbol | |
|---|
| ID | 6476536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2468620 |
|---|
| End bp | 2469234 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642731387 |
|---|
| Product | type II secretion system protein J |
|---|
| Protein accession | YP_002028592 |
|---|
| Protein GI | 194365982 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4795] Type II secretory pathway, component PulJ |
|---|
| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0654355 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 29 |
|---|
| Fosmid unclonability p-value | 0.781056 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCGCG CCGTGGGCGG TTTCACCCTG ATCGAGGTGA TGATCGCGAT CACCATCATG
GGCGTGCTGG CGCTGATCTG CTGGCGTGCG CTCGACAGCG TGGCCAGCAG CGACCAGCGC
CTGCGACAGG CAGATGCCGA GACCACCACC GCACTGCGCG TGCTGCAGCA GTTCCAGCGG
GATATCGAGA TGCGTGCGGA TGATGCGCTG ATGAATGGCG CGGTGCGTCC GGCTGATCGT
CCGCAGCGAT TGCTGCCTCC GTCGCTGGTG AGTGAACGGC ACCCGGATGG AAGCTTCGCG
CTGGAGATCA CCCGCAGCGT GGGCAGCGAT GGGCTGCACT GGCAGCGGGT GCGCTGGTGG
CGTCAGGGCA GCACACTGTG GCGGGCCAGC GGCGCGGCCA CGGACCGGTA TCCATTGCCG
GCGCCGGAAC AATCCAAGGG CATCGTGGTA GCCAAGGATG TGCAGCGGTT CGAGCTGCGG
GCGTGGCAGC CCGGCGCGGG ATGGGCCGTG TTGCCGAGCA AGGGCGAGGT GCTGCCAGCC
ACCGGACTGG AGCTGCGGCT GGGCCTGCGC GATGGGCGTG GGCCGTTGAG CTACCGGCGG
GTGCTGGAGT TGTAG
|
|---|
| Protein sequence | MKRAVGGFTL IEVMIAITIM GVLALICWRA LDSVASSDQR LRQADAETTT ALRVLQQFQR
DIEMRADDAL MNGAVRPADR PQRLLPPSLV SERHPDGSFA LEITRSVGSD GLHWQRVRWW
RQGSTLWRAS GAATDRYPLP APEQSKGIVV AKDVQRFELR AWQPGAGWAV LPSKGEVLPA
TGLELRLGLR DGRGPLSYRR VLEL
|
|---|
| |