| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2192 |
|---|
| Symbol | |
|---|
| ID | 6476523 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2457069 |
|---|
| End bp | 2457710 |
|---|
| Gene Length | 642 bp |
|---|
| Protein Length | 213 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642731374 |
|---|
| Product | isochorismatase hydrolase |
|---|
| Protein accession | YP_002028579 |
|---|
| Protein GI | 194365969 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG1335] Amidases related to nicotinamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.338623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 35 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAGTG AACCGATCCG CGACCCGGCC AGCGACCACC TGCTGACCCC GCAGAATTCC
GCCTTCATCA TCATCGACTA CCAGCCGGTG CAGGTGAACT CCATCGCCTC GATGGACCGC
CAGCTGCTGG TCAACAACAT CGTCGGCACC GCCAAGGCCG CAGTGGCCTA CGGGCTGCCG
ATCGTGCATT CGACGGTCAA CGTCAAGACC GGCCTGAACA AGCCGCCGAT TCCGCAGCTG
CGCAAGGTGC TGGCCGACCA CCCCACCTAC GACCGCACCA CCATCAATTC CTGGGAGGAC
GTCGAGTTCC GCCAAGCGGT GGAAGCCACC GGCCGTCGCA AGCTGATCAT GACCGCGCTG
TGGACCGAAG CCTGCCTGAC TTTCCCGGCC CTGGATGCGT TGAAGGAAGG CTATGAGGTG
TATGTGGTGG TCGACGCCGT CGGTGGCACT TCGCTGGCGG CACACGAAGC CGCACTGCGC
CGCATCGAAC AGGCAGGTGG CCAGCTGATC AGCGTGCCGC AGCTGTTCTG CGAGCTGCAG
CGCGACTGGG CCCGTTCGGA AACGGTGCCG GCGTTCATGA ACCTCTTCAT CGAAACCGGT
GGTACGGCGG GTATCCAGTT CTCGTACGAT CGTACCGAGT GA
|
|---|
| Protein sequence | MSSEPIRDPA SDHLLTPQNS AFIIIDYQPV QVNSIASMDR QLLVNNIVGT AKAAVAYGLP
IVHSTVNVKT GLNKPPIPQL RKVLADHPTY DRTTINSWED VEFRQAVEAT GRRKLIMTAL
WTEACLTFPA LDALKEGYEV YVVVDAVGGT SLAAHEAALR RIEQAGGQLI SVPQLFCELQ
RDWARSETVP AFMNLFIETG GTAGIQFSYD RTE
|
|---|
| |