Gene Smal_2187 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2187 
Symbol 
ID6476518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2452635 
End bp2453591 
Gene Length957 bp 
Protein Length318 aa 
Translation table11 
GC content72% 
IMG OID642731369 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_002028574 
Protein GI194365964 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.779531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACGT CCGAACCCTC GCCGCGTCAG GCCAGGCAGG CGTTGCGCTG GGTGATCCGG 
TGCAGTGCAG GCCCGCTGCC GGAACGCCAG CAACGAACCC TGCAGCGCTG GCTGCAGGCC
GATCCACGTC ATGCGCTGGC CTGGCGCCAG CAGCAGGCCT TCTGGCAGGG GCTGGATGCC
GCCGGGCCCG AGGTGCTGGC GGCGCTGCCC GAGCTCACGA CCGATCGCGA GGGGCTGCGC
CCGATCGCGC CGCGCCGCCG CCTGCCATGG CTGCTGGCCA GTGCCGCCGC CGTCGTACTG
ATGGTGACGG CGGCACCGCA CGCGCTGCTG CTGGCACGCA GTGACCTGCG CAGCAGCGAT
GCACCACGCG TGGTGCAGCT GGAAGACGGC AGCACCGCCG TGCTCGATGC GGGCACCGCG
CTGGCGCTCG AGTTCGACGG CCAGCAGCGT CGCCTGCACC TGCTGCGCGG GCAGGCCTGG
TTCCAGGTGG CGCACGAGGC TCGTCCGTTC CAGGTCGAGG CCGCGGGCGG CCGGGTCCGT
GATATCGGCA CCGCCTTCAG CGTGTCGATA CAGGACACCA CGGTCACCAC CCAGGTCAGC
GAGGGTGTGG TCGACGTGCG TCCGGGCGAC GGCAGCGTGC AGCGCCTGCA TGCCGGGCAG
TCACGGGCGT TCCGTGACGG TCGCTGGCTG CAGCCGGTGC AGCTGGAAGA TCCCGAGGCC
ATGGCGCCGT GGCGGCGTGG TGAGGTCGCG ATCGACAATC TGCCGGCCGC GCAGGCCATC
GCCGATCTGG CGCGCTATCG GCGTGCACCG GTCTGGGTAC TGGGCGGGCA GGGCGCGAAC
GTGCGGGTCA GTGGCCTGTT CCACCTGCAG CAGCCGGAGA CCGCCATTGA TGCGGTGGCC
GCACAGGCAG GACTGCGCGT GCAGCGCTTG CCCGGTGGCG CGTTGGTGCT GTGGTGA
 
Protein sequence
MTTSEPSPRQ ARQALRWVIR CSAGPLPERQ QRTLQRWLQA DPRHALAWRQ QQAFWQGLDA 
AGPEVLAALP ELTTDREGLR PIAPRRRLPW LLASAAAVVL MVTAAPHALL LARSDLRSSD
APRVVQLEDG STAVLDAGTA LALEFDGQQR RLHLLRGQAW FQVAHEARPF QVEAAGGRVR
DIGTAFSVSI QDTTVTTQVS EGVVDVRPGD GSVQRLHAGQ SRAFRDGRWL QPVQLEDPEA
MAPWRRGEVA IDNLPAAQAI ADLARYRRAP VWVLGGQGAN VRVSGLFHLQ QPETAIDAVA
AQAGLRVQRL PGGALVLW