Gene Smal_2186 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2186 
Symbol 
ID6476517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2449330 
End bp2452452 
Gene Length3123 bp 
Protein Length1040 aa 
Translation table11 
GC content66% 
IMG OID642731368 
ProductTonB-dependent receptor 
Protein accessionYP_002028573 
Protein GI194365963 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.996858 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGTCCA CGGCATCTGC CTGTCATCGC CGCGCCACCG TCCTGGCCCT GGCCATCTCT 
ACTGCATTGC TGCCGCTGGC CTGGGTGCCG GTCGTGCAGG CGCAACCGGC GGTCGTCGCG
CCGCTGCGCC CGTACACCAT TCCGGAACAA CCCTTGGCCG ACGCCGTGCG CGCCTTTGGC
CGCCAGGCCG ATGTGCAGGT GGTGTTCCGC AGCGATCTGG TGGAAGGCCG GCGCTCCAGT
GCAGTCAAAG GCGAGTACAG CCAGATGCAG GCGCTGCAGC AGCTGTTGCG CGGCAGCGGC
GTGCGCGCAC AGCGCGGCAT GGACGGCACC TGGAGCCTGC GGGCCGCAGC GGAGGCGGGT
GAAGGGGAAG GGGTGCGGGT GACCGAAACA CTGGACGTGG CCGGTCGCCT TCACTCGGAA
GGGGGTGAGG CGCGCGATCG GCGCGGCTAC GATGATGTGT TCGCGCTGGA TCTGACCACG
GCGTATTCGG GGCGCGACCG GGTGGAGCGC TATCGCGGTT CCAATCCGGC CGACGTGGTC
AAGGATCTGG TCGGAGTGTT CAGCGGCGAT GCGCGCAACA GCGGCGCGCT GGACGTCAAC
ATCCGTGGCA TCCAGGGGCC CGGGCGGGTG CCGGTCAGCA TCGACGGTGG CGAACAGGCG
CTCACGGTCT GGCGCGGCTA CAACGGCGTC AGCAACCGCA ACTACATCGA TCCCAACCTG
ATTGGTGGCA TCCAGGTCAT CAAGGGGCCA GGGCTGGTGC GCGATGTGCA CAGCGGGATC
GGTGGTGCGC TGGTGATCAA GACCATCGAC GTTGTCGACA TTGTTGCTGC CGGCGAGCGC
TTCGGCGGGG AGCTGAAGAT GGAAGGCAGC AGCAATGCAG TGGCACCGCG CCTGCCGAGG
CTGCACACCG GCGAGGATTA CCGCACCGTG CCAGGCTTCC CGCAGGGCTC GCCGAACTCA
CCCTATGACG ACCGCACCCT GGTGGTGCCG GTGAAGTCGC GTAGTGGCAA CAATCCCTTC
GATGGTGAGG ACCAGGCCTG GCGATTGGCA CTGGGTGTGC GCGGTGACAA CGTCGACCTG
ATGGCCGCCT ACGCCTGGCG CAAGCGTGGC AATTATTTCT CCGGCAGCAA GGGAAGCGCG
TACTACGACC AGGACCGGCG CGAGCAGTAC GAGTACCAGG GCATCGACTA CATCACCACG
CTGGCGCGCT ACTTCAAGCC GGGCGATGAA GTGCCCAACA CCTCCAGCGA ACAGGAGTCG
TGGCTGGTCA AGGGAACCTG GCAGATCAAT GACGACCAGC AGCTGAAGGC CACCTGGCGG
CGCACGCTGT CGCACTACGG CGAGATCATG CCGTCGCGCA TCCTGTCCGC GCCGGACTAC
GGTCGCATCC AGTGGCCGCT CAGTCGGGTT GCGTCCGATG CCTGGAACCT GGAGTACCGC
TTCCAGCCGG CCGGTAGCCG ATGGCTGGAC GTGTACGCCA ATCTGTGGCG CACCGAAACG
GAAAGTGACA CCTACACCGC CGGTGGCTTC CCCAACTTTG CACCGGGCAA TCCGGCATGG
AACCCCGGGG TCAGCCCGAT CCTGCGCAAC ACCGCACTGG CCAATGCACG CAACGACCGT
ACCGGCCTGA CCCTGAGCAA CCGCTTCGCG CTGCATTCCA CCCTGGATCT GACCGTGGGC
GGCAACTGGC AGTACGAGAA GCTGGGTTCG CGCGATCCGT ATTTTGGTAC CACCGATGGG
TGGCGCATGT TCCCGCGTAC CGGCCGCCGC CAGGAGGGCG AAGGCTATCT CAACCTTGAA
TGGCGCCCGG TCGAGTTCCT TACCCTCAAT GCCGGCGTGC GTTACAGCCG CTACTGGGCC
TTCGACGACT TCCTGCAGGC GCATCCGGAA CTGCTGACCA AGGGCGTGGG AAGCAAGGAG
GCCACCTACC GGGTCAATGA ACTGCCTGAG CGTCCGGCCA GCCTGCAGGC GCAGATCGAT
GCGCTGGAGG CCGACCGCGA ATTCTGGGAG AGCATCGGCA TGGGCTCGGT CGTCGATGAC
GCACTGCGCG GCCTGCTGGC CTATTACGAA ACGCCGCAGG CGGTGGAGCA CAGGGTGCCC
TGGTTGCCCG ATGCCAACGG CAACTATGCC CGCGCGACCA ACCCCTGCCT CAACGGCGAG
GTGGCGGCCA TTCCCGGGGT GCTGCCGCTC TATGCCGGCA GCGACCGGGT CTGCAACATC
GGCAACACCA TGCAGTCCAG GCCGGTCGAC GGGCGCAACG ATCGTCAGCG CGATCACGCG
TGGCTGCCCA CCTTCTCGGC CACGGTGAAC CTGTCCAAGG CCGCGCGCGT CTACCTGCGC
TACAGCGAAG CGGTGCGCTT CCCGAGCATG TTCGAAAGCA CCATTGCGTT CTCCAGCAGC
CTCAATCCGC TGTACACGCT CAAGCCCGAG CATGCCTACA ACTACGAATT TGGCTACGTG
CACAACCTGT CGGGGCTATT CGGCAACACC GCCGATGCCG ACGTCAAGCT GGCCTACTAC
GTGCACAAGA CCCGCAACGT GATCGAGCGC GATGCCTACT TCCTGTTCGA CAACATCGAC
AAGCAGACCA TCCGTGGCAT CGAGCTGCAG GCGCGTTTCG ACAACCGGCG CTTCTTCACC
GACCTGGGCA TCTCGCGCAC GCTGGAGAAC GAAGTCTGCG ACGAAAGCAG CGCCGTTCTG
CTCGATGCCA ATCGCGGCCT GGTTCCCAAC TGCGTGCAGG ATGGCTTCGT CAGTGGCTAC
CTGCTGACCC AGGCGATCCC GAAGCTGTCG GTGAACTGGT CGCTGGGCAC GCGCCTGTTC
GACGAGCGGC TGGAACTGGG CAGCCGCATC GTCCACTACC AGCGCCATGA CAACCCCGAT
CTGCAGGCCT ACCGCGACCG CCTGCTGGCC GGTGGCAGCA GCCTGCTCTG GCAGAACGTG
CCGTTCACCT GGGGAAACAT CACCACTGTC GATGCCTACG CGCGCTGGCG CGTCAACGAC
CACGCCAGCG TCGAGCTGGT GGGCAGCAAC CTGGGCAACC GCTACTACGT CGATCCGGCG
ACGCGCTCAA CGCTGCCGGC ACCGGGCCGC ACCTTCAAGC TCGGCATCAC CGCACGCTTC
TGA
 
Protein sequence
MPSTASACHR RATVLALAIS TALLPLAWVP VVQAQPAVVA PLRPYTIPEQ PLADAVRAFG 
RQADVQVVFR SDLVEGRRSS AVKGEYSQMQ ALQQLLRGSG VRAQRGMDGT WSLRAAAEAG
EGEGVRVTET LDVAGRLHSE GGEARDRRGY DDVFALDLTT AYSGRDRVER YRGSNPADVV
KDLVGVFSGD ARNSGALDVN IRGIQGPGRV PVSIDGGEQA LTVWRGYNGV SNRNYIDPNL
IGGIQVIKGP GLVRDVHSGI GGALVIKTID VVDIVAAGER FGGELKMEGS SNAVAPRLPR
LHTGEDYRTV PGFPQGSPNS PYDDRTLVVP VKSRSGNNPF DGEDQAWRLA LGVRGDNVDL
MAAYAWRKRG NYFSGSKGSA YYDQDRREQY EYQGIDYITT LARYFKPGDE VPNTSSEQES
WLVKGTWQIN DDQQLKATWR RTLSHYGEIM PSRILSAPDY GRIQWPLSRV ASDAWNLEYR
FQPAGSRWLD VYANLWRTET ESDTYTAGGF PNFAPGNPAW NPGVSPILRN TALANARNDR
TGLTLSNRFA LHSTLDLTVG GNWQYEKLGS RDPYFGTTDG WRMFPRTGRR QEGEGYLNLE
WRPVEFLTLN AGVRYSRYWA FDDFLQAHPE LLTKGVGSKE ATYRVNELPE RPASLQAQID
ALEADREFWE SIGMGSVVDD ALRGLLAYYE TPQAVEHRVP WLPDANGNYA RATNPCLNGE
VAAIPGVLPL YAGSDRVCNI GNTMQSRPVD GRNDRQRDHA WLPTFSATVN LSKAARVYLR
YSEAVRFPSM FESTIAFSSS LNPLYTLKPE HAYNYEFGYV HNLSGLFGNT ADADVKLAYY
VHKTRNVIER DAYFLFDNID KQTIRGIELQ ARFDNRRFFT DLGISRTLEN EVCDESSAVL
LDANRGLVPN CVQDGFVSGY LLTQAIPKLS VNWSLGTRLF DERLELGSRI VHYQRHDNPD
LQAYRDRLLA GGSSLLWQNV PFTWGNITTV DAYARWRVND HASVELVGSN LGNRYYVDPA
TRSTLPAPGR TFKLGITARF