Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2186 |
Symbol | |
ID | 6476517 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | - |
Start bp | 2449330 |
End bp | 2452452 |
Gene Length | 3123 bp |
Protein Length | 1040 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642731368 |
Product | TonB-dependent receptor |
Protein accession | YP_002028573 |
Protein GI | 194365963 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.996858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGTCCA CGGCATCTGC CTGTCATCGC CGCGCCACCG TCCTGGCCCT GGCCATCTCT ACTGCATTGC TGCCGCTGGC CTGGGTGCCG GTCGTGCAGG CGCAACCGGC GGTCGTCGCG CCGCTGCGCC CGTACACCAT TCCGGAACAA CCCTTGGCCG ACGCCGTGCG CGCCTTTGGC CGCCAGGCCG ATGTGCAGGT GGTGTTCCGC AGCGATCTGG TGGAAGGCCG GCGCTCCAGT GCAGTCAAAG GCGAGTACAG CCAGATGCAG GCGCTGCAGC AGCTGTTGCG CGGCAGCGGC GTGCGCGCAC AGCGCGGCAT GGACGGCACC TGGAGCCTGC GGGCCGCAGC GGAGGCGGGT GAAGGGGAAG GGGTGCGGGT GACCGAAACA CTGGACGTGG CCGGTCGCCT TCACTCGGAA GGGGGTGAGG CGCGCGATCG GCGCGGCTAC GATGATGTGT TCGCGCTGGA TCTGACCACG GCGTATTCGG GGCGCGACCG GGTGGAGCGC TATCGCGGTT CCAATCCGGC CGACGTGGTC AAGGATCTGG TCGGAGTGTT CAGCGGCGAT GCGCGCAACA GCGGCGCGCT GGACGTCAAC ATCCGTGGCA TCCAGGGGCC CGGGCGGGTG CCGGTCAGCA TCGACGGTGG CGAACAGGCG CTCACGGTCT GGCGCGGCTA CAACGGCGTC AGCAACCGCA ACTACATCGA TCCCAACCTG ATTGGTGGCA TCCAGGTCAT CAAGGGGCCA GGGCTGGTGC GCGATGTGCA CAGCGGGATC GGTGGTGCGC TGGTGATCAA GACCATCGAC GTTGTCGACA TTGTTGCTGC CGGCGAGCGC TTCGGCGGGG AGCTGAAGAT GGAAGGCAGC AGCAATGCAG TGGCACCGCG CCTGCCGAGG CTGCACACCG GCGAGGATTA CCGCACCGTG CCAGGCTTCC CGCAGGGCTC GCCGAACTCA CCCTATGACG ACCGCACCCT GGTGGTGCCG GTGAAGTCGC GTAGTGGCAA CAATCCCTTC GATGGTGAGG ACCAGGCCTG GCGATTGGCA CTGGGTGTGC GCGGTGACAA CGTCGACCTG ATGGCCGCCT ACGCCTGGCG CAAGCGTGGC AATTATTTCT CCGGCAGCAA GGGAAGCGCG TACTACGACC AGGACCGGCG CGAGCAGTAC GAGTACCAGG GCATCGACTA CATCACCACG CTGGCGCGCT ACTTCAAGCC GGGCGATGAA GTGCCCAACA CCTCCAGCGA ACAGGAGTCG TGGCTGGTCA AGGGAACCTG GCAGATCAAT GACGACCAGC AGCTGAAGGC CACCTGGCGG CGCACGCTGT CGCACTACGG CGAGATCATG CCGTCGCGCA TCCTGTCCGC GCCGGACTAC GGTCGCATCC AGTGGCCGCT CAGTCGGGTT GCGTCCGATG CCTGGAACCT GGAGTACCGC TTCCAGCCGG CCGGTAGCCG ATGGCTGGAC GTGTACGCCA ATCTGTGGCG CACCGAAACG GAAAGTGACA CCTACACCGC CGGTGGCTTC CCCAACTTTG CACCGGGCAA TCCGGCATGG AACCCCGGGG TCAGCCCGAT CCTGCGCAAC ACCGCACTGG CCAATGCACG CAACGACCGT ACCGGCCTGA CCCTGAGCAA CCGCTTCGCG CTGCATTCCA CCCTGGATCT GACCGTGGGC GGCAACTGGC AGTACGAGAA GCTGGGTTCG CGCGATCCGT ATTTTGGTAC CACCGATGGG TGGCGCATGT TCCCGCGTAC CGGCCGCCGC CAGGAGGGCG AAGGCTATCT CAACCTTGAA TGGCGCCCGG TCGAGTTCCT TACCCTCAAT GCCGGCGTGC GTTACAGCCG CTACTGGGCC TTCGACGACT TCCTGCAGGC GCATCCGGAA CTGCTGACCA AGGGCGTGGG AAGCAAGGAG GCCACCTACC GGGTCAATGA ACTGCCTGAG CGTCCGGCCA GCCTGCAGGC GCAGATCGAT GCGCTGGAGG CCGACCGCGA ATTCTGGGAG AGCATCGGCA TGGGCTCGGT CGTCGATGAC GCACTGCGCG GCCTGCTGGC CTATTACGAA ACGCCGCAGG CGGTGGAGCA CAGGGTGCCC TGGTTGCCCG ATGCCAACGG CAACTATGCC CGCGCGACCA ACCCCTGCCT CAACGGCGAG GTGGCGGCCA TTCCCGGGGT GCTGCCGCTC TATGCCGGCA GCGACCGGGT CTGCAACATC GGCAACACCA TGCAGTCCAG GCCGGTCGAC GGGCGCAACG ATCGTCAGCG CGATCACGCG TGGCTGCCCA CCTTCTCGGC CACGGTGAAC CTGTCCAAGG CCGCGCGCGT CTACCTGCGC TACAGCGAAG CGGTGCGCTT CCCGAGCATG TTCGAAAGCA CCATTGCGTT CTCCAGCAGC CTCAATCCGC TGTACACGCT CAAGCCCGAG CATGCCTACA ACTACGAATT TGGCTACGTG CACAACCTGT CGGGGCTATT CGGCAACACC GCCGATGCCG ACGTCAAGCT GGCCTACTAC GTGCACAAGA CCCGCAACGT GATCGAGCGC GATGCCTACT TCCTGTTCGA CAACATCGAC AAGCAGACCA TCCGTGGCAT CGAGCTGCAG GCGCGTTTCG ACAACCGGCG CTTCTTCACC GACCTGGGCA TCTCGCGCAC GCTGGAGAAC GAAGTCTGCG ACGAAAGCAG CGCCGTTCTG CTCGATGCCA ATCGCGGCCT GGTTCCCAAC TGCGTGCAGG ATGGCTTCGT CAGTGGCTAC CTGCTGACCC AGGCGATCCC GAAGCTGTCG GTGAACTGGT CGCTGGGCAC GCGCCTGTTC GACGAGCGGC TGGAACTGGG CAGCCGCATC GTCCACTACC AGCGCCATGA CAACCCCGAT CTGCAGGCCT ACCGCGACCG CCTGCTGGCC GGTGGCAGCA GCCTGCTCTG GCAGAACGTG CCGTTCACCT GGGGAAACAT CACCACTGTC GATGCCTACG CGCGCTGGCG CGTCAACGAC CACGCCAGCG TCGAGCTGGT GGGCAGCAAC CTGGGCAACC GCTACTACGT CGATCCGGCG ACGCGCTCAA CGCTGCCGGC ACCGGGCCGC ACCTTCAAGC TCGGCATCAC CGCACGCTTC TGA
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Protein sequence | MPSTASACHR RATVLALAIS TALLPLAWVP VVQAQPAVVA PLRPYTIPEQ PLADAVRAFG RQADVQVVFR SDLVEGRRSS AVKGEYSQMQ ALQQLLRGSG VRAQRGMDGT WSLRAAAEAG EGEGVRVTET LDVAGRLHSE GGEARDRRGY DDVFALDLTT AYSGRDRVER YRGSNPADVV KDLVGVFSGD ARNSGALDVN IRGIQGPGRV PVSIDGGEQA LTVWRGYNGV SNRNYIDPNL IGGIQVIKGP GLVRDVHSGI GGALVIKTID VVDIVAAGER FGGELKMEGS SNAVAPRLPR LHTGEDYRTV PGFPQGSPNS PYDDRTLVVP VKSRSGNNPF DGEDQAWRLA LGVRGDNVDL MAAYAWRKRG NYFSGSKGSA YYDQDRREQY EYQGIDYITT LARYFKPGDE VPNTSSEQES WLVKGTWQIN DDQQLKATWR RTLSHYGEIM PSRILSAPDY GRIQWPLSRV ASDAWNLEYR FQPAGSRWLD VYANLWRTET ESDTYTAGGF PNFAPGNPAW NPGVSPILRN TALANARNDR TGLTLSNRFA LHSTLDLTVG GNWQYEKLGS RDPYFGTTDG WRMFPRTGRR QEGEGYLNLE WRPVEFLTLN AGVRYSRYWA FDDFLQAHPE LLTKGVGSKE ATYRVNELPE RPASLQAQID ALEADREFWE SIGMGSVVDD ALRGLLAYYE TPQAVEHRVP WLPDANGNYA RATNPCLNGE VAAIPGVLPL YAGSDRVCNI GNTMQSRPVD GRNDRQRDHA WLPTFSATVN LSKAARVYLR YSEAVRFPSM FESTIAFSSS LNPLYTLKPE HAYNYEFGYV HNLSGLFGNT ADADVKLAYY VHKTRNVIER DAYFLFDNID KQTIRGIELQ ARFDNRRFFT DLGISRTLEN EVCDESSAVL LDANRGLVPN CVQDGFVSGY LLTQAIPKLS VNWSLGTRLF DERLELGSRI VHYQRHDNPD LQAYRDRLLA GGSSLLWQNV PFTWGNITTV DAYARWRVND HASVELVGSN LGNRYYVDPA TRSTLPAPGR TFKLGITARF
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