Gene Smal_2172 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2172 
Symbol 
ID6476503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2435320 
End bp2435994 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID642731354 
Producttwo component transcriptional regulator, winged helix family 
Protein accessionYP_002028559 
Protein GI194365949 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.113197 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC TGCTGATCGA AGACGATGCC GCCCTGGCCG ATGGACTGAT CCGCGCCCTG 
CAGGGTGCCG GCCATCTGTG CGACCACCTC TCGCGCGGAC TGCACGCGCC TGCGGCGCTG
GCCAGTGCTC CGTATGACGT GATGGTGCTC GACCTTTCAT TGCCGGACGT GGATGGCCTC
GACCTGCTGT CGCGCCTGCG CAACGATGGC GCCACCTTGC CGGTACTGAT CCTGACCGCA
CGCGATGGCG TGGAGGACCG CATCCTCGGC CTCGACCGCG GCGGCGATGA CTATCTGGCA
AAACCATTCG CGCTGGGCGA GCTGGAAGCG CGCCTGCGTG CGTTGTCGCG CCGCCGCAGT
GACGCACCGG CGCAGAAGCG ATTGGGCCGG CTGTGCTTCG ACAGCATCCG CAACGAAGTG
CAGGTGGACG GCCAGCGTAT CGAGCTGACC GCGCGCGAGC TGTCGCTGGT CGAAGCGTTG
ATGCAGCACC CCGGCCGCAC CGTGACCAAG CAGCGCCTGT TCGATGCGCT TTACAGCTGG
GACCACGAGG CCAACCTGTC GGTGATCGAG GTGCACGTCA GCCGCCTGCG CCGCAAGCTG
GAGCAGGCCC ACGCCGGCGT CGGCATCCGC ATGCTGCGTG GCCTCGGCTA CCGGCTGGAG
GTCGTGGGTG ACTGA
 
Protein sequence
MRILLIEDDA ALADGLIRAL QGAGHLCDHL SRGLHAPAAL ASAPYDVMVL DLSLPDVDGL 
DLLSRLRNDG ATLPVLILTA RDGVEDRILG LDRGGDDYLA KPFALGELEA RLRALSRRRS
DAPAQKRLGR LCFDSIRNEV QVDGQRIELT ARELSLVEAL MQHPGRTVTK QRLFDALYSW
DHEANLSVIE VHVSRLRRKL EQAHAGVGIR MLRGLGYRLE VVGD