| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2143 |
|---|
| Symbol | |
|---|
| ID | 6476403 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2402772 |
|---|
| End bp | 2403296 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | 642731325 |
|---|
| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
|---|
| Protein accession | YP_002028530 |
|---|
| Protein GI | 194365920 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
|---|
| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCCAGC CGACACTTCC CCGCCCACCT GCGCTGCCGC TGGTGACCTC GCTGGTGCGC
CACTACGAGG AACTGGTGGA CTACCTGCAT CGCCGGTTCC GCTCGCCCGG GCTGGCCCGC
GAAGTGGTGC ACGATGTCTG TGTGCGCCTG CTGGAACGCC CGGCCGCGCA TGACGCCCGC
CAACCGATCG CGCTGCTGCG CAGGATCGCC CACGATGCGG CGGTCGACCG CTGCCGCGCC
GAGGATCTGC GCCGGCACTG GGTGGAGCCC CGCGCCGAGC TTCCCGAAGG CGCCTGCGAG
CGCCCCGGAC CTGAGCGCCA GGCGCAGGGC CAGCAGGCGC TGCAGCGGCT GACCACCAGC
ATCGAGCGCA TGCCCTGCCG GCGGCAGCAG GTGTTCATCC TGCACAAGAT CCACGAGCTG
CCCCAGGCCG AGGTGGCGCA GCGGATGGGC ATCGGCCTGA AGGCAGTGGA ACGTCATCTG
CGCCTGGCCA TGGCCGACTG CCGGCTGCAC GGTGCGCTGT GGTGA
|
|---|
| Protein sequence | MSQPTLPRPP ALPLVTSLVR HYEELVDYLH RRFRSPGLAR EVVHDVCVRL LERPAAHDAR
QPIALLRRIA HDAAVDRCRA EDLRRHWVEP RAELPEGACE RPGPERQAQG QQALQRLTTS
IERMPCRRQQ VFILHKIHEL PQAEVAQRMG IGLKAVERHL RLAMADCRLH GALW
|
|---|
| |