Gene Smal_2082 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2082 
Symbol 
ID6476342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2340005 
End bp2340931 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content66% 
IMG OID642731264 
Producttranscriptional regulator, LysR family 
Protein accessionYP_002028469 
Protein GI194365859 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.422321 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.427363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCACCC AACGCCAGCT GCCATCGCTT GCCGCCATCC GCGCCTTCGA GGCGGCGGCG 
CGGCTGGGCA GCTTCGCGCG TGCCGCCGAA GAGCTCGACA CCACTGCGGC ATCAGTGAGC
TACCACGTGC GGCGTCTGGA GGCCCAGACT GGTACCTGCC TGTTCCTGCG CCACGCACAG
CATGTGGAAC TGACGGTTGC CGGTGCCAGC ATCGCGCAGG AGGCTACAAG GGCGTTCGAT
GCACTTCGTG CCAGTTTCAT GCGCGCTGGG GACATGGATG CAGCGCGACT GCGCCTGTCC
GTATTGCCAA CGCTGGGCAC CAGTTGGTTG ACGCCGCGAC TGGGCGGCTT CCGCGCGCGT
CACCGGGAGC TTGTACTGGA GCTGGATCTA TCGGCGGAAC CGCAGGACCT GGCAGCGGGT
CGCTTCGACG CGGCCATCCG CAACGGGCAT GGGGACTGGC CCGGCTTGCA GGCCACGCCC
CTGTTTCCCA GCGTATTCAC ACCGCTGTGC GCACCGTCGC TGCTGCCAGC CGCACGTGAC
CTGGGTCGTG GCGGGCTGGA TGTCGCGCTG CTCGGGCGAC CAGACTGGTG GGCAGTGTGG
TTCTCCGCTC ATGGACAGAT TCCACCGCCG GCGCGGGAGA ATTTTGTTGC ACCATTTGCT
GTCGAGCACC TGGACATCGG TGCGGCGATT GCGGGGCAGG GGATCGCCAT TGGTTCGCCG
ATCCTGTTCC AGGCAGAGCT GGACAGCGGG CGACTGGTAC AGGCTCATCC AGGTGTGGCC
AGTGACGGCC GCAGTTTCTG GTTCGTGGCA CCAACTGCGC GCAGCGGCAG CATCAAGGTC
AGCGCGTTCC GCGATTGGCT TGGCGAGCAG GCGGCTGAGG CACGACGTGC AGCACGTCAT
CATCTGGCCA AAGCGGTGAC GCCATGA
 
Protein sequence
MVTQRQLPSL AAIRAFEAAA RLGSFARAAE ELDTTAASVS YHVRRLEAQT GTCLFLRHAQ 
HVELTVAGAS IAQEATRAFD ALRASFMRAG DMDAARLRLS VLPTLGTSWL TPRLGGFRAR
HRELVLELDL SAEPQDLAAG RFDAAIRNGH GDWPGLQATP LFPSVFTPLC APSLLPAARD
LGRGGLDVAL LGRPDWWAVW FSAHGQIPPP ARENFVAPFA VEHLDIGAAI AGQGIAIGSP
ILFQAELDSG RLVQAHPGVA SDGRSFWFVA PTARSGSIKV SAFRDWLGEQ AAEARRAARH
HLAKAVTP