Gene Smal_2081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2081 
Symbol 
ID6476341 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2339547 
End bp2340008 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content69% 
IMG OID642731263 
Producttranscriptional regulator, AraC family 
Protein accessionYP_002028468 
Protein GI194365858 
COG category[K] Transcription 
COG ID[COG2207] AraC-type DNA-binding domain-containing proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value0.256 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.670144 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGA GCCCCGAACT ACTGCGGCGC CTGCTGCGCG CCAAGGACCG GATGGACCGC 
GCCAGCCACG AAGAGTGGTC AGTCGCGCGC CTGGCCGAGG TCAGTGCGGT ATCGCCAGCG
CACTTCGCGC GCTCGTTCAA GCAGGCCTTC GGGCTGCCGC CACACCGCTA CCTGCTCAGC
CGCCGCATCG AGCGGGCGGT GGCCATGCTG CGCGACACCG ATCTGCCGGT GACCGAGATC
GCCGCCCAGA CCGGCTGGTC CAGCCTGGGT ACGTTCGGCC GCATCTTCCG TGACATCACC
GGCGATAGTC CGGGCAATGT GCGGGAGCGC GAGCGCGCCG GCCAATCGCT ACCCGCCACC
GTGCCGGAAT GCCACGTACG TGCCGCGCAG CGCCCGGACT TGAACATTGC GGTGCTGGAA
AAGCGCCGTC GCGCCGCAGT TGCCAGCGAA CGCTCCGCGT AA
 
Protein sequence
MNQSPELLRR LLRAKDRMDR ASHEEWSVAR LAEVSAVSPA HFARSFKQAF GLPPHRYLLS 
RRIERAVAML RDTDLPVTEI AAQTGWSSLG TFGRIFRDIT GDSPGNVRER ERAGQSLPAT
VPECHVRAAQ RPDLNIAVLE KRRRAAVASE RSA