Gene Smal_2080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2080 
Symbol 
ID6476340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2337026 
End bp2339503 
Gene Length2478 bp 
Protein Length825 aa 
Translation table11 
GC content63% 
IMG OID642731262 
ProductMCP methyltransferase, CheR-type 
Protein accessionYP_002028467 
Protein GI194365857 
COG category[E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism 
COG ID[COG0520] Selenocysteine lyase
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.646014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.992336 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGATG TCTCGCCGCA CCAATGCAAG GTGGTATCCG AACGAAACTG GTCGCTCAGC 
ACCTTCATGG AATTCTATGA GCGCGTGCTG AGCCCACGAA TATTCCGTCC TTACGGAAAA
CTGCTGGCGC AGGAGATCGC TGCGGACATC CGTGCCGCAC CGGGTGCTAC CGACATCCTG
GAGGTCGCCT GCGGAACAGG GGTAATAACG GCCAACCTGT ACCAGGACCT GGCCAAGCCG
CTGGGCCTCA ATCTGGTCGC CACGGACCTG TCGGCGATCG CGGTGGACGT GGCCCGGAGC
GTATTGAGCG CCGAGCTTCA ACATGACGTC CCACTGCTTT CCGACGTCGA CATGGCCGAG
CTGCCCTTCG CGGACAACAG CTTCGACATC ATCGTGTGTG GTTTCGGCTT GATGTTCCCT
CCCGACAAGG CCAGGGTTGC CCGCGAATTC AGGCGCGTAC TTCGCCCAGG AGGCAGGGTC
TATGCTACGG CGTTCCACTA CAACCAGTTG TTTGAACTGG CACGCCAGCA GTCGCAGAGG
CACTTTGGCA TGCCATCGCG ACTGATGGAT GCGGCCCTGA GCCTGACCGA TCCGTCCCCC
ATCACGCGCG CCTTCGCGAT CGAGGGGCTG GATCGCAGCG ACGGCGAATG CGCCGCGCTG
CGCCCGCTCG CGTTCTCGCT TGGCGAAGCT GATGTCCGCG AGTTCCTCTT CAACGCGTGC
ATCCTGCTGG AGGAGTTCAA TCAGTGCGAT ACCCCCAGCC GGGAACGCTA CCTCGATGCG
ATGATGGAGG CGATCCATGT ACAGGTCCCA GACCAGTGCT ATCGGGTGGA GGCCTGGCTG
ATAAGCGGCA GGATGGATCC GACGGGTGTG GCCCTGCCAA CGGTCATTCC GCCCGCTGAT
TTCCGGCCCT TGCTCGAGTT CCGCAACCTC TCGCGCCTGA CGACGTCGCC GTGCCCTGTG
GGCTCGCAAG CTCCATCCTG CGCGCAGGCC GTGGCAGCCT TCCACGATGC CAGGGTGCAG
TTCCTCGCCG ACCATCCCGC TTATCCCGAG CACCAGGTCG AGACAATGCG CCAGCATGAG
TACGCGCGGC TGGATGAGCA ACAAGTGACC TACCTGGATC ATGTTGGCGG AACGCTGCCA
CCTGACAGCC TGCTTGAGCA GGACTGCCAG GCGCTCAAGA AGACCATTCT CGGTAATCCG
CACAGCGGAT CGAAGGCGTC CCATGCTGCC TACCAGAAGG CCTGCGATGA GATCTACGCC
TTCTTCGGAT GCACGTCGGA GGAGTACGAG ATCATCTTTA CCGCCAATGC CAGCAGTGCG
ATTCGGCTGG TGGCCGAATC ATTCCCCTTC CAGCAGGGTT CGCAGCTACT GCTGACCAAG
GACAACCACA CATCGGTGCA TGGCTTGCGG GAGTACGCCA CCTCAAAGGG GGCGATGGTG
AAGTACATCC CCCTGGACGA TGACCTGCTG CTGCATGACG GGCTGATGGA GCGTGCGTTG
CAACGGCTCC AGCGCGGTGC GCCGCACCTG CTGGCATTCC CGGCGCAGTC CAATGCGACC
GGCGTCCGCC ACGATCTGGC GTGGATCGGG AAGGCCCAGC AGCAGGGCGC GTGGGTGCTG
TGTGATGCGG CGGCCTGGGT TCCGCAATCA CGGCTGGACT GCACGATCCA TCGTCCCGAC
TTTGTCGTAG CGTCCTTCTA CAAGATCTTC GGCTACCCCA CCGGCGCAGG TTGCCTGCTC
GCCCGGCGGG CCGCCCTCGG CATGCTAAAG CCACCCTCCT TCGCGGGCGG AGGCGTCTGC
TACTACTCGG GACCGTGGTC GCCCACCGAT CGCCTGCTCT ACCGCGACGC CGGCCAGCGT
TTCGAAGTGG GCACGCCCAA CTATGCGGCC TTCCCGGCGA TCGCCAGAGG CTTCGAGTTC
ATCGCCGCGA TGGGCGGCGT AGAAGCGCTG GCCAAGCGCT CAAGCGCCCT GGCGGCGTGG
ACAGACACGC GATTGTCATC CCTTCGCCAC CGCATCAAGG GTGACCTGCC GCTGTGCCGG
ATCTATGGGC CGCCTCCCGC GCTAAAGGGT GCAACACTGA TGCTGAACTT CTTCGACTGC
TATGGCTCGA TCATGCCGCA CGCACGCATC AAGCGCGCCG CAGAGCGTTT CGGCATAACC
CTGCGCAACG GCTGTTTCTG CAACCTCGGT GCCGTGCAGC AGGCGACCTA CGCGACGGCA
GGCGCCGAAC ACTGCGAACT GGACAAGACC GGGAAGATCC TCGACTGCAA GACCTTCGAC
GAGAAGATCC TCGAGAAGGG AGATTGTGGT GCGGTCAGGA TTTCATTCGG GCTTGGATCC
AATTTCGCCG ACGCCTACCG CTTCTGCCTG TTCGCCAGCT GCCTGCTGGA TACTGATGTT
TCCGGGCTGG AGGACCCGGC AGAGGAGACG CCAGCGGAGA CGGCGGACAC GCTGATCGCC
GGCACCGTGC CAGCCTGA
 
Protein sequence
MQDVSPHQCK VVSERNWSLS TFMEFYERVL SPRIFRPYGK LLAQEIAADI RAAPGATDIL 
EVACGTGVIT ANLYQDLAKP LGLNLVATDL SAIAVDVARS VLSAELQHDV PLLSDVDMAE
LPFADNSFDI IVCGFGLMFP PDKARVAREF RRVLRPGGRV YATAFHYNQL FELARQQSQR
HFGMPSRLMD AALSLTDPSP ITRAFAIEGL DRSDGECAAL RPLAFSLGEA DVREFLFNAC
ILLEEFNQCD TPSRERYLDA MMEAIHVQVP DQCYRVEAWL ISGRMDPTGV ALPTVIPPAD
FRPLLEFRNL SRLTTSPCPV GSQAPSCAQA VAAFHDARVQ FLADHPAYPE HQVETMRQHE
YARLDEQQVT YLDHVGGTLP PDSLLEQDCQ ALKKTILGNP HSGSKASHAA YQKACDEIYA
FFGCTSEEYE IIFTANASSA IRLVAESFPF QQGSQLLLTK DNHTSVHGLR EYATSKGAMV
KYIPLDDDLL LHDGLMERAL QRLQRGAPHL LAFPAQSNAT GVRHDLAWIG KAQQQGAWVL
CDAAAWVPQS RLDCTIHRPD FVVASFYKIF GYPTGAGCLL ARRAALGMLK PPSFAGGGVC
YYSGPWSPTD RLLYRDAGQR FEVGTPNYAA FPAIARGFEF IAAMGGVEAL AKRSSALAAW
TDTRLSSLRH RIKGDLPLCR IYGPPPALKG ATLMLNFFDC YGSIMPHARI KRAAERFGIT
LRNGCFCNLG AVQQATYATA GAEHCELDKT GKILDCKTFD EKILEKGDCG AVRISFGLGS
NFADAYRFCL FASCLLDTDV SGLEDPAEET PAETADTLIA GTVPA