Gene Smal_2077 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2077 
Symbol 
ID6476337 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2335433 
End bp2336128 
Gene Length696 bp 
Protein Length231 aa 
Translation table11 
GC content67% 
IMG OID642731259 
ProductHAD-superfamily hydrolase, subfamily IA, variant 3 
Protein accessionYP_002028464 
Protein GI194365854 
COG category[R] General function prediction only 
COG ID[COG0637] Predicted phosphatase/phosphohexomutase 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0155497 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCCGTT TTCCCTTCGA TGCCGTGCTG TTCGACTGCG ATGGCGTACT CGTTGATTCC 
GAACCGCTGG TAGCCCGCGT GCTCTCGGAA ATGCTGACCG AGCGCGGCTG GGCACTCACC
CCTGCGCAGG CGGGTGAAGT CTTCCTCGGC CAGTCCGTGG CCCATCTGGC CGGGCTGATC
GAAGAGCGCA CCGGCAAGCT GTTCACCGAG GAATGGCTGG AAGAGTTCCG CCAGCAGCGC
AACCGGGCAT TGGAACGCGA CCTGGTTGCG ATCCAGGGTG CGCCCGAGGC CGTGCGTGCG
ATCGCCGCCG CCACCGGCGG GAGGATCGCC TGCGCGTCCG GTGCGGACCT GCACAAGGTG
AAGCTGCAAC TGGGCAAGGT CGGCATCCTT GATGCCTTCG GTGCCCACGT GTTCAGCGGC
CAGGACATGC CGCACACCAA ACCGCATCCG GATGTCTATC TGGCTGCCGC TGCAGCGCTG
GGCGTGGACC CGAAACGCTG CGCGGTGATC GAAGACACCG TGACCGGCGC AACGGCCGGT
GTGGCCGCTG GCGCAACCGT ATTCGGTTTC AGCGAAGGCG GTCCGCACCA CAGTACGCCG
GAGGCCCTGC GTGCCGCGGG TGCGCAGGTG ATCTTCCAGC GCATGGAAGA CCTGCCCGCC
CTGCTTGCCG CCCATGCGGT CGACGCAGTC GCCTGA
 
Protein sequence
MSRFPFDAVL FDCDGVLVDS EPLVARVLSE MLTERGWALT PAQAGEVFLG QSVAHLAGLI 
EERTGKLFTE EWLEEFRQQR NRALERDLVA IQGAPEAVRA IAAATGGRIA CASGADLHKV
KLQLGKVGIL DAFGAHVFSG QDMPHTKPHP DVYLAAAAAL GVDPKRCAVI EDTVTGATAG
VAAGATVFGF SEGGPHHSTP EALRAAGAQV IFQRMEDLPA LLAAHAVDAV A