| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_2062 |
|---|
| Symbol | |
|---|
| ID | 6476240 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2313449 |
|---|
| End bp | 2315089 |
|---|
| Gene Length | 1641 bp |
|---|
| Protein Length | 546 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642731244 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_002028449 |
|---|
| Protein GI | 194365839 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.754742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 41 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTCG CTCCCGATGC CTCTGCCTAT CCGCTGCTGA TCAAGCAACT GCTGCACACG
CCGCTTGCGG TGAATCCTGA CCAGGAGATC GTCTACGGCG ATTCGGTCCG CTTCGACTAC
CGCACCCTGC AGGCGCGCAT CTGCCAGTTG GCCGGACTGC TGACTTCGTT GGGGGTGAAG
CACGGCGATA CGGTTGCGGT GATGGACTGG GACAGCAACC GCTATCTGGA AGCGTACTTC
GCCGTGCCGA TGATCGGCGC GGTGCTGATG ATGGTGAACG TGCGCCTGGC GCCCGAGCAG
ATCGCCTATA CGCTGAACCA CAGCGGTGCA CGGGTGATCC TCGCCAACCG TGAGTTCCTG
CCGATACTGG AAGGCATCGA CGGACAGTTG CCAGACCTGC GCACGCGCAT CCTGCTGGAC
GATGCCGGCG GCCCGTTGCC AGACGGTTTC GTGACCGAGT ACGAAGCCGG TCTGCGGACT
GCCACTGCGA CCACCGATTT CCCGGACTTC GACGAGAACA CCCGCGCAAC GGTGTTCTAC
ACCACCGGCA CCACCGGCCT GCCCAAAGGC GTCTACTTCA GCCATCGGCA ACTGGTCCTG
CATTCGCTGG CAGGGATGGC GGCGCTGGGC AGCGCGGCCA GCCAGGGGCG CCTGCACCGC
GGTGATGTCT ACATGCCGAT CACCCCCATG TTCCATGTGC ACGCCTGGGG CCTGCCGTAT
GTGGCGACAC TGCTGGGCAT CAAGCAGGTC TACCCCGGCC GCTATCTGCC AGCCAGCCTG
CTGGCATTGA TCGCCCGCGA GAAAGTGACC TTCTCGCACT GCGTGCCGAC CATCCTGCAT
ATGCTGCTGG AGCACCCGCT CGCGGCGGAG ACGGACCTGG GCAACTGGAA GGTGATCATC
GGCGGCGCGG CCCTACCGCG GGCATTGGCG CAGCGGGCAC TGGCACGCGG CATCGACATC
TTCGGTGGCT ACGGCATGTC CGAGACCTGC CCGCTGCTGA CCCTGGCGCA AATCGATGCG
GATGCCGTGA CCGATACGGA TGAGGTTCTT TCGCTGCGCA CCAAAGCCGG CATTCCGGTA
CCGCTGGTTG ACCTGCGCAT TGTCGATCCA GACATGAAGG ATGTGGCACA CGATGGCATG
GCCACCGGCG AGGTCGTGGT GCGGGCGCCC TGGCTCACCC AGGGTTACCT GCACAATCCG
GATGCATCGG CGGCATTGTG GGCAGGCGGC TACCTGCACA CCGGGGACAT CGGCAACATC
GACAGCGGCG GCTACCTGCG CGTGACCGAC CGCATCAAGG ATGTGATCAA GACCGGTGGC
GAGTGGATCT CATCGCTTGC GCTGGAGGAC ATCATCGCGC TGCATCCGGC GGTCAGCGAG
GTCGCGGTGA TCGGTATCGC CGACACGAAA TGGGGCGAGC GGCCGTTGCC GCTGGTGGTC
AGGCAGCCTG GCAGTGAGGT GACCGAAGCG GAGATCATCG AACTGGTCGC TGCGCGAAGC
CGCTCAGGGG ACATCTCACG GTATGCGATT CCGGAACGGG TCAGTTTCGT GGAATCGATC
GAGCGGACCA GCGTGGGCAA GATCAACAAG AAGAAGCTGC GTGGGTTGCA TGACCCAGCG
ACTGGCTCGG GCCGTGGGTG A
|
|---|
| Protein sequence | MSFAPDASAY PLLIKQLLHT PLAVNPDQEI VYGDSVRFDY RTLQARICQL AGLLTSLGVK
HGDTVAVMDW DSNRYLEAYF AVPMIGAVLM MVNVRLAPEQ IAYTLNHSGA RVILANREFL
PILEGIDGQL PDLRTRILLD DAGGPLPDGF VTEYEAGLRT ATATTDFPDF DENTRATVFY
TTGTTGLPKG VYFSHRQLVL HSLAGMAALG SAASQGRLHR GDVYMPITPM FHVHAWGLPY
VATLLGIKQV YPGRYLPASL LALIAREKVT FSHCVPTILH MLLEHPLAAE TDLGNWKVII
GGAALPRALA QRALARGIDI FGGYGMSETC PLLTLAQIDA DAVTDTDEVL SLRTKAGIPV
PLVDLRIVDP DMKDVAHDGM ATGEVVVRAP WLTQGYLHNP DASAALWAGG YLHTGDIGNI
DSGGYLRVTD RIKDVIKTGG EWISSLALED IIALHPAVSE VAVIGIADTK WGERPLPLVV
RQPGSEVTEA EIIELVAARS RSGDISRYAI PERVSFVESI ERTSVGKINK KKLRGLHDPA
TGSGRG
|
|---|
| |