Gene Smal_2060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2060 
Symbol 
ID6476238 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2309305 
End bp2312640 
Gene Length3336 bp 
Protein Length1111 aa 
Translation table11 
GC content68% 
IMG OID642731242 
Productmulti-sensor hybrid histidine kinase 
Protein accessionYP_002028447 
Protein GI194365837 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only
[T] Signal transduction mechanisms 
COG ID[COG0591] Na+/proline symporter
[COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.749505 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGACGC CCTCCGTCGT TCTGTTCGCC TGTATTGCGT GGACCGTACT GCTGTTTGGC 
GTGGCCCTCT GGGGCGAGCG CCGGGGGCAT CGGCTTTCGA AGGTGTGGCC GCTCATCTAT
GCGCTGTCGC TGGCAGTGCA CTGCACCGCG TGGACCTATT ACGGCGCGGC GTCGCAGGGC
CTGCAATGGG GCTTCCCGAT TCCACCGACC CTGGCGGGCA TGGCGCTGAT ATTTGCGTTC
GGCCTGCCGT TCCTGCTCCG CCTGGGGCGG CTGGCCAAGC AGCACAACAG TGCCACCATC
GCCGATCTGG TTGTCGCGCG GCTGCGTGCG GATCGGGGAC TCGGGTTCAC CATCACCCTG
GTCGCGCTGT TCGGCATCAT TCCCTACATC GCCCTGCAGC TGAAGGCTGT CAGCCAGGGC
CTGGGCGCTC TGCTCGGTGA TCGCTTCGCG CCTGCCGGCG CGCAGCTGGA CATGTCGTTC
TGGTTCGCGT TGACGATGGC CGCGTTCACG CTGCTGTTCG GCGCACGCAA GGCGTCGGCC
ACCGAACCCA ATCGTGGCAT CGTGGTCGCG CTGGGGCTGG AGTCGCTATT GAAGCTGGTG
GCGCTGCTGG CCATCGGCCT CTACGCGGCG CTGTCGGTGC GCCAGGCGGG CACGCCTTTG
CTGGAGAAGA TGGCACAGCT TCCACCACCG GCCATCATGC CGGACTACCT CACCATGGTC
GCGCTGGGAG CAATCTCCGC GTTCACCCTG CCCCACCAGT TCCATGTCGG CGTGGTCGAG
CTGCGCCAGA CCTCGGACCT GAAGACGGCG CGCTGGCTGT TCCCGGTCTA CCTGCTGCTG
ATCGGGCTGC CGTCGGTGCC GATGGCGCTG GCCGGTGCCG CGCAGCTGCC CGCATCGGTG
TCGCCCGACC TGTACGTGCT GGCGCTGCCG CAGGCCGGTG GCCACCACCT GCTGGCCCTG
CTGGCTTACC TGGGCAGCCT GAGCGCCGCC ACCGGCATGA TGATCCTTTC CGGGCTGACC
CTGTCGATCA TGCTCGGCAA CCATGGCTTC GGTTCGAGGC TGCTGGACGG CATTGCCGGC
GGCGCGGCGG CAGCTGACCT GCGTCCGCGC GTGCTGGCCT TCCGCCGCGC CGGCATCCTG
GCCGTGTTCC TGATGTCGTG GCTGTACAGC CGGGCGATGA GTGACACCGA GGCACTCAGC
GATTTCGGTC TGATGTCCTT CACTGCCCTC TCGCAGCTGG CACCGGCGGT GCTGCTGGCG
GTGTATCGCC CGCGCACGCC CTCCCCGGCC ATCATCGCCG GCATCGTGCT GGGGTCGCTG
GCCTGGTTGT GGCTGGTACT GCTGCCGATG GTGGTCCCCG CCGCGCCGGC GTCGACCGCC
CCTGACGGAC TGCATTGGTT GGCCGTGGTC TCGCTGCGCC CGCAGCCGGG CCATATCGCC
ATCAGCATGG GCGCCAGCCT GGCGGTGAAC CTCCTGACGA TTGCGCTGGT GTCGCGCGCG
GTGCGCCCTT CGTTGCCGCG ACGACGGGAT GCGGTGGCGG CCGCCTCGCT GCGCAAGACG
GCCGGACGCT TCCTCGGCCA GGAGCGGGCC CGGCAACTGA TGGACGGGCA TGCCGGGCAG
CTGCTGGATG ACGACCGGGT CATCACCATC GAACGCGAAC TGACCGCCGT GGTCGGTGCG
GGCATGGCGA GGCTGCTGGT GGAGGCCGCT CGCGACGGCG GCACTGCGCC ACTGGACGCG
GTGACCCGTG CAGTCGGCGA AGCAACCCAG GTGCTGCGCT TCAACCAGCG CCTGCTGGAG
GCGGCGCTGG AGAACATGAG CCAGGGCATC AGCGTGGTCG ACGCGCAGCT GCAGCTGGTG
GCCTGGAACA GCCGCTACGC CGCGTTGTTC AAGTTTCCGC CCGAGTTGCT GCAGGTCGGG
CAGCCGGTGG TCAATCTGAC AGCGTGGGCG CTGGCCGAAC TGAAGATCGG CGACGGCCCT
GGTGACTCTC GCGACAAGGC CCTGCAGCGT CGCGCCGCAC ACATGCGGCG TGGCACGCCG
CATCTGTCCG AACGGATCTT CCCCGACAAC ACCATCGTCG AGATCCGTGG CAATCCGATG
CCCGGCGGTG GCTACGTGGC CACCTTCACC GACGTCACCG CCTTCCGCCG CGCCGAGGAA
GCGCTCAAGC GCAGCAATGA AACCCTGGAG CGCCGCGTAC AGGACCGCAC CGCACGGCTG
GAACAGGCAG TGCACGAAGC CGAGCGCGCG AACGTTGCCA AGACACGCTT CCTGACGGCG
GTCGGCCACG ACCTGATCCA GCCACTGCAT GCGGCGCAGC TGCTGACCGA TGCGATGTCG
CAGCACATCG AATCGGAGTT CCTCGACAGT TTCCTGCGCC AGATCCGTGG TGCGCTGGAC
TCCACCGACG ACCTGCTGTC CGGGCTGCTG GATATCTCCC GGCTTGAGGC GGGCGGGCTG
GTCGCCGATC CGCGCCCCTT CGCGCTGTCG ACCGTCCTGG ATCCGCTCGC GCAGGAGTTC
GCGGTACTTG CGGCGGCGCG CGGCCTGCAG TTCCGCCATG TGCGGAGCCA GGCCTGGGTC
CATAGCGACC CCCTGCTGCT GCGCCGGGTG CTGCAGAACT TCCTGGCCAA TGCCATTCGT
TACACCCGCC ATGGCGGTGT GTTGCTCGGT GTGCGCCGCC AGGGACAGGC ACTGCTGATC
GGTGTGCATG ACACCGGCCC CGGCATTGCT CCGGAGCAGC AGGCGGTGGT GTTCGAGGAG
TTCCACCGGG TCGATCGCAG CAACGGCCAG GGACTGGGCC TGGGCTTGAC CATCGCGCAC
CGCATCGCCG ACCTGCTGCA TGCGCCGCTG CAGTTGCGCA GCGTGCTCGA TCACGGCTCG
GCGTTCTCGA TCAGCGTGGT GCGGGCAGCA CCGCCGGCAG CCCCGCGCGC GGAGTCCACC
GCAGCGGGCA CCAGCACCAT CAAGGGCATC CGCGTGCTGG TGGTCGACAA CGACGCGGAC
GCGCTGGAGG CGATGCGGCA GATGCTGCTG GCCTGGGGCT GCGAAGTGGT CGCGGTGCGC
GCCGCCAGCG AGGTCGGCGC GTCGGCACAT GTGGCCGCAC TGTGGTTGTT CGACTACCAC
CTGGATGATG GCGATACCGG CGTGGCGCTC TGGCAGCGGC TGCAAGCCGA GCATGGGCAG
CGGCCGACAG TGATCCTCAG CGCCGATACC GGCAGCGATA CGCGCGAGGC GGTGCGTGCG
GCAGGGCTTT CACTGTTGAA CAAGCCCTTC AAGCCACTGG CGCTGCGCTG GGCGATCAAC
CATCTGCTGG CAGCACCTGG CACAGCAACA TCCTGA
 
Protein sequence
MLTPSVVLFA CIAWTVLLFG VALWGERRGH RLSKVWPLIY ALSLAVHCTA WTYYGAASQG 
LQWGFPIPPT LAGMALIFAF GLPFLLRLGR LAKQHNSATI ADLVVARLRA DRGLGFTITL
VALFGIIPYI ALQLKAVSQG LGALLGDRFA PAGAQLDMSF WFALTMAAFT LLFGARKASA
TEPNRGIVVA LGLESLLKLV ALLAIGLYAA LSVRQAGTPL LEKMAQLPPP AIMPDYLTMV
ALGAISAFTL PHQFHVGVVE LRQTSDLKTA RWLFPVYLLL IGLPSVPMAL AGAAQLPASV
SPDLYVLALP QAGGHHLLAL LAYLGSLSAA TGMMILSGLT LSIMLGNHGF GSRLLDGIAG
GAAAADLRPR VLAFRRAGIL AVFLMSWLYS RAMSDTEALS DFGLMSFTAL SQLAPAVLLA
VYRPRTPSPA IIAGIVLGSL AWLWLVLLPM VVPAAPASTA PDGLHWLAVV SLRPQPGHIA
ISMGASLAVN LLTIALVSRA VRPSLPRRRD AVAAASLRKT AGRFLGQERA RQLMDGHAGQ
LLDDDRVITI ERELTAVVGA GMARLLVEAA RDGGTAPLDA VTRAVGEATQ VLRFNQRLLE
AALENMSQGI SVVDAQLQLV AWNSRYAALF KFPPELLQVG QPVVNLTAWA LAELKIGDGP
GDSRDKALQR RAAHMRRGTP HLSERIFPDN TIVEIRGNPM PGGGYVATFT DVTAFRRAEE
ALKRSNETLE RRVQDRTARL EQAVHEAERA NVAKTRFLTA VGHDLIQPLH AAQLLTDAMS
QHIESEFLDS FLRQIRGALD STDDLLSGLL DISRLEAGGL VADPRPFALS TVLDPLAQEF
AVLAAARGLQ FRHVRSQAWV HSDPLLLRRV LQNFLANAIR YTRHGGVLLG VRRQGQALLI
GVHDTGPGIA PEQQAVVFEE FHRVDRSNGQ GLGLGLTIAH RIADLLHAPL QLRSVLDHGS
AFSISVVRAA PPAAPRAEST AAGTSTIKGI RVLVVDNDAD ALEAMRQMLL AWGCEVVAVR
AASEVGASAH VAALWLFDYH LDDGDTGVAL WQRLQAEHGQ RPTVILSADT GSDTREAVRA
AGLSLLNKPF KPLALRWAIN HLLAAPGTAT S