Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2057 |
Symbol | |
ID | 6476235 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2305689 |
End bp | 2307875 |
Gene Length | 2187 bp |
Protein Length | 728 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642731239 |
Product | TonB-dependent receptor |
Protein accession | YP_002028444 |
Protein GI | 194365834 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.904465 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGA ATTGTTTGAG TCTCATGATC GGCGCGCTGC TGGCCACGGG GCCGGTACTG GCACAGGAAT CACCGACGGC AGGCAGATCC GCTTCGCCGA CCAACCTGGA CAGCATCAAG GTCACCGCGC GCAAGCGTGA GGAAACCCTG CAGGAAGTGC CGGTGGCAGT CACCGCCTTT ACCTCGGAGG CGCTGGACAG GATGAATGTC CAGGACATCA GCGACCTGGA CGCGCAGGTG CCCAACCTGA CCATCTACGC GGCGCGCGGC GCCAGCAGCA CGGTCACCGC CTACATCCGA GGCATCGGCC AGTCCGATCC CACCTGGGGC GCCGATCCGG GCGTAGGCAT CTACCTGGAT GACGTCTACA TCGCGCGCCC GCAGGGTGCG CTGCTGGATG TGTTCGATGT CTCGCGTATC GAGGTGCTCC GCGGCCCGCA GGGCACGCTC TACGGCAAGA ACACCATCGG CGGCGCGATC AAGTACATCT CGCGCGGCCT GCCCACCCAG ACCGAGGGCT TCGCCCAGAT CACCGTGGGC AACTACAGCC AGCTGGATGC GAAGGCGGCC ATCGGCGGCC CGATTGGCGG CGCCGACAGT GGCCTGCGCG CCCGTGTGGC GGTGGCCAGC ATGAACCACG ACGGGTTTGG CGAGAACACC TTCAACGGCC AGCCGGTCAG CGACAAGCAG ATCAATGCCG CACGACTGAA CGTCGGCGCG TACGCGGGCG ATGACTTCGA CGTGCAGTTC GCACTGGACT GGATCGATGA CCAGTCCGGC ATGCGCGGTT CGAAGATGCT GGCGCCCAAT CCGTTCCTGC GCGCATACCC GCCGATGGAC AGCCGCTATG ACATCCGCTC GGGCATGCGC AACCTCAACA ACGTGGAGAG CAAGGGTGCC TCGGCCACGG TGAACTGGCG GCCGAACGAC GACATTGCAC TGAAGTACGT GGTCGCCAAG CGTGAATCGG ACAGCGAGGC CAACATCGAC TTCGATACCG CGCCGGTCAA GCTGGCCGAC GTGGGTGGCA CCTATCACGA CGACCAGGTC AGCAACGAAG TGCAATTGAA CTACGATGCC GGCGGCCGGG TGCGCGGTGT GGTCGGCCTG TACCAGTTCA GTGGCGAGGC GGGCGGCCAG ATCCAGAACA GCTACTTCAG TGCGCAGTTC GCCGACAACC AGGGCAAGGT GTTGACCGAC AGCATCGCGC TGTACGCGGA CTGGACCTTC GACCTGACCA GCAAACTCAA GCTGGATGTG GGCGCCCGTT ACACCGACGA GGACAAGCGC GCGATCGTGC TGAACCGCCT GTACGCCGAC CCGGGTTTCA GCCGGCCGGT GGCGGTGACC GCGGACTTCG ACAAGAAGAC CAACTTCAAG AACGTCTCGC CCAAGGTCTC GCTGGACTAC CAGATCACTC CGGACATCAT GGTCTACGGC CTGGCCACGC GTGGCTTCAA GTCCGGTGGC TACAACATCC GCGCCAACGC TGTGGCCGTG CCACGCTCGG CCGAGCCGTT CGACGACGAG ACCGTGGACA GCTACGAGGT CGGCAGCAAG ATGGCCTTCC TCGACCAGCG CCTGTTCCTC AATCTGTCGG CCTTCTACAA CAAGTACAAG GACATCCAGT TGTCGGTGTT CACCGGCCTG GATACCAATG GCGATGGCGT CGATGACTCC TTCTTCGGTG ATTTCACCAA TGCCGGCGCA GGTACGGTCA AAGGCCTGGA AGTCGAGTAC CAGTACCTGC CCAGCCAGCA CTGGCTGATT TCCGGCAACC TGGCGTGGCT GGATACCAAG TACGACGAGT ACATGGATCG TGGCGTCAAC GTGGCCAGGC AGATGAAGTT CACCAACGCG CCGGAGTTCT CGGGCGCGTT CAACGTGGAG TACCGCACCG AGCTGGCCAA TGGCAGCAAC CTGTCGGCAC GGGTGAGCTA CAGCTACCAG AGCGAGGTGT GGCCGACCAC CGACCTGAGC CCGGTGATCC GCCAGCAGGG CTACGGGCTG GTCAATGCCG GCGTCATCTG GCGCCTGGAT GATGCGTGGA CCTTCTCGCT GCAGGGCACC AACCTGGCCG ACAAGGAATA CCGCACCACC GGCTACAACA TCCCGGCGGT CGGCACGCTG ATTGGCTTCT ATGGTCCGCC ACGCCAATAT AGCCTCAGCG TCCGTTACGA TTTCTAG
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Protein sequence | MKRNCLSLMI GALLATGPVL AQESPTAGRS ASPTNLDSIK VTARKREETL QEVPVAVTAF TSEALDRMNV QDISDLDAQV PNLTIYAARG ASSTVTAYIR GIGQSDPTWG ADPGVGIYLD DVYIARPQGA LLDVFDVSRI EVLRGPQGTL YGKNTIGGAI KYISRGLPTQ TEGFAQITVG NYSQLDAKAA IGGPIGGADS GLRARVAVAS MNHDGFGENT FNGQPVSDKQ INAARLNVGA YAGDDFDVQF ALDWIDDQSG MRGSKMLAPN PFLRAYPPMD SRYDIRSGMR NLNNVESKGA SATVNWRPND DIALKYVVAK RESDSEANID FDTAPVKLAD VGGTYHDDQV SNEVQLNYDA GGRVRGVVGL YQFSGEAGGQ IQNSYFSAQF ADNQGKVLTD SIALYADWTF DLTSKLKLDV GARYTDEDKR AIVLNRLYAD PGFSRPVAVT ADFDKKTNFK NVSPKVSLDY QITPDIMVYG LATRGFKSGG YNIRANAVAV PRSAEPFDDE TVDSYEVGSK MAFLDQRLFL NLSAFYNKYK DIQLSVFTGL DTNGDGVDDS FFGDFTNAGA GTVKGLEVEY QYLPSQHWLI SGNLAWLDTK YDEYMDRGVN VARQMKFTNA PEFSGAFNVE YRTELANGSN LSARVSYSYQ SEVWPTTDLS PVIRQQGYGL VNAGVIWRLD DAWTFSLQGT NLADKEYRTT GYNIPAVGTL IGFYGPPRQY SLSVRYDF
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