Gene Smal_2017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2017 
Symbol 
ID6476195 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2260310 
End bp2261347 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content69% 
IMG OID642731199 
Productanti-FecI sigma factor, FecR 
Protein accessionYP_002028404 
Protein GI194365794 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.764723 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCGATC TCCCTTCTGC CGCAGGTTCC GACCCGTTTG CCCTGCATGA GGCGGCCGCC 
GCGTGGCTGG TGCGGCGGCA GGATGCGGCC TGGCAACCGA AGGATGAGGC GGCCCTGCAG
CACTGGCTGG CCGAGAGCGA AGCGCACCGA CAGGCGTTCG CCGACGTGGC CAGAACCTGG
GACGACCTCG GCCAGCTGCC GCGCCCCGTG CTGGCCTCGG ACGCGCGTGC GGTGATCACC
CCAGCAGTAC CTGCCATTCA ACGACGGGGC AGGGCGGTGC GGCACGCACG CTCGTGGCGC
CTGCCACGCG TTGCGGCGGC TGCGGCCGTG GCGATGCTGG CCTTGGGGTA CCTCGGCTAC
GGTTGGTACG CCGCGCCCAG CTACGTACAG GACGTGGCCA CCGGCGCGGG CGAGATACGT
GATCTTCAAT TGCCGGACGG CTCACGGATT TCGCTCAATG CACGCAGCAC GCTGGCCGTG
CATTTCTATC GATCCCGCCG TGAAGTAGTG CTCAGCCAGG GCGAGGCGTT CTTCGAGGTC
GCCCCGGCGG CCGACCGTCC CTTCACCGTC GATGCCCAGC GCAGCCGGGT GACGGTGGTC
GGCACGACCT TCAATGTGCG CAATGGGCCG GGCGAAGTCG TGGTCAAGGT GCTGCATGGG
CACGTGCGGG TGCAGCCGGA TCGCGCCGAA GGTGCCTCGC CGGTCAGCCT GCACGCCGAA
CAGGGCCTGG CCGTTACCAC GCTCACCGCT GCTTATCGCC CCATCGCCGC AAGCGCAGAC
AGCATTGGCG GTTGGCGCAA TGGACGCCTG GTGTTCCGGC GCACCCCGCT GGACGAAGTG
GCGCAGGAGG TGGGGCAGTA TCTGGGCCAT CCCGTCACGT TGGGCCAGCC AGGGCTGAAG
TTCCTGCCGG TCTCCGGCTA CGCAGCCACC GATGCCCCGG CCACCTTCCT GGAAGCACTG
CCGGATCTGT TGCCGGTGCA GGTAACGCGC ACTGCCCAGG GCGGCTATCG CATCGACGAG
CGGCCCGTCG CCCGCTGA
 
Protein sequence
MTDLPSAAGS DPFALHEAAA AWLVRRQDAA WQPKDEAALQ HWLAESEAHR QAFADVARTW 
DDLGQLPRPV LASDARAVIT PAVPAIQRRG RAVRHARSWR LPRVAAAAAV AMLALGYLGY
GWYAAPSYVQ DVATGAGEIR DLQLPDGSRI SLNARSTLAV HFYRSRREVV LSQGEAFFEV
APAADRPFTV DAQRSRVTVV GTTFNVRNGP GEVVVKVLHG HVRVQPDRAE GASPVSLHAE
QGLAVTTLTA AYRPIAASAD SIGGWRNGRL VFRRTPLDEV AQEVGQYLGH PVTLGQPGLK
FLPVSGYAAT DAPATFLEAL PDLLPVQVTR TAQGGYRIDE RPVAR