Gene Smal_2014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2014 
Symbol 
ID6476192 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2254756 
End bp2255793 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content60% 
IMG OID642731196 
Productconserved hypothetical signal peptide protein 
Protein accessionYP_002028401 
Protein GI194365791 
COG category[R] General function prediction only 
COG ID[COG1073] Hydrolases of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.354348 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.746698 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACGC TGCTGCTTTC TCTGGTCCTC GCGACCATCC CCCTCACTGC AGTTGGACAG 
GACATGGCCC ACGGCGCGGA CAACTTCTAT CACAGCACTC AGCTCACCAG CGAGAAGGTG
CGCTTCAACA ACCAGTACCA CATGCAGATC GTCGGCAATC TGTACGTACC GAAGAACCGT
AGGCCTGGGC AAGCATTGCC CGCCATCATC GTGGGCCATC CCATGGGTGC GGTGAAGGAG
CAGAGTGCGG ATCTCTACGC ACAGAAGCTG GCTGAACAAG GTTTCGTGAC CCTGGCTATC
GACCAGTCAT TCTGGGGTGA AAGTGCGGGC GAGCCGCGCA ATGCGGTTGC GCCGGACATC
TATGCCGAAG CCTTCAGCGC AGCCGTCGAC TACCTGGGCA CGCAGCCACA GGTGGATCGC
GAACGGATCG GCGTGCTTGG CATCTGTGGC AGTGGCAGTT TCGTGATCAG TGCGGCCAAG
ATCGACCCGC GCATGAAAGC CATTGCTACA GTCAGCATGT ACGACATGGG CGCTGCGAAC
CGCAGTGCCC TCAACCGCTC GCAGAGCGTT GAGCAGCGCA AGGCCGTGAT TGCTGCCGCC
GCGCGCCAGC GTTGGATTGA AGCTGAGGGC GGCGCCGCAC AGTACACCTC TGGCACCGTG
CATGTGCTTG AGGCAGACAC CCATCCGATC CAGCGCGAGT TCTACGACTT CTACCGAACG
CCGCGTGGCG AATTCACGCC GGCCGGCTCA TCACCGCAGC TCACCACCCA CCCGACGCTG
ACCAGCAACG TGAAGTTCAT GAACTTCTAT CCGTTCAACG ACATCGAGAC CATTTCGCCG
CGTCCGATGT TGTTCATTTC GGGTGATCAG GCGCATTCAA AGGAATTCAG TGAGGAGGCC
TACCGACTGG CGGGACAGCC GAAGGAACTG CTGTGGGTGA AGGGTGCGGG CCATGTGGAT
CTGTACGACC GCACCGATCT GATTCCCTTT ACGGAGCTGG GGGCGTTCTT CCGGAAGCGC
TTGGACGGAA GCATGTGA
 
Protein sequence
MKTLLLSLVL ATIPLTAVGQ DMAHGADNFY HSTQLTSEKV RFNNQYHMQI VGNLYVPKNR 
RPGQALPAII VGHPMGAVKE QSADLYAQKL AEQGFVTLAI DQSFWGESAG EPRNAVAPDI
YAEAFSAAVD YLGTQPQVDR ERIGVLGICG SGSFVISAAK IDPRMKAIAT VSMYDMGAAN
RSALNRSQSV EQRKAVIAAA ARQRWIEAEG GAAQYTSGTV HVLEADTHPI QREFYDFYRT
PRGEFTPAGS SPQLTTHPTL TSNVKFMNFY PFNDIETISP RPMLFISGDQ AHSKEFSEEA
YRLAGQPKEL LWVKGAGHVD LYDRTDLIPF TELGAFFRKR LDGSM