Gene Smal_2011 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2011 
Symbol 
ID6476189 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2252030 
End bp2253259 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content68% 
IMG OID642731193 
Productmajor facilitator superfamily MFS_1 
Protein accessionYP_002028398 
Protein GI194365788 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAC TCAATCTTCC CCCGGCCGGG GCGGGCACGG CCGCGCCTGC GCGGTCGGCA 
ACCCCCAGGG AATGGGGCGC GGTGCTGGCC CTTACACTCG GCGCGTTCGC TCTGGTTGCT
TCCGAGTTCA TGCCAATCAG CCTGCTGACG CCCATCGCCA CCGATCTGCG GGTCAGTGAA
GGCCAGGCCG GACAGGCCAT TGCGGTGTCC GGCGCGTTCG CCCTCGTTAC CAGTCTGCTG
GTTTCGCCGC TGGCCGGGCA GCTGGACCGC AAATGGCTGC TGCTGGGCCT CACCACCGCG
ATGATCCTCT CGGGCACGCT GGCGGCACTG GCGCCCAGCT TCCCGGTGTT CATGCTGGGC
CGTGCGCTGA TCGGCGTGGC CATCGGTGGC TTCTGGGCCA TGTCGGCCGC CACCGCCATG
CGCCTGGTTC CTTCGCACCA GGTGCCCCGC GCACTGGCCA TCGTCAACGG CGGCAACGCG
CTTGCCACGG TCATTGCGGC GCCGATGGGC AGTTACTTCG GCGCCATCAT CGGTTGGCGC
GGTGCGTTCT TCTCGCTGGT GCCGGTGGCT GTGGTGGCCC TGCTGTGGAA GATCGCCGCG
CTGCCATCGA TGAAGGCGAC CGCCGGGCGC ACTTCCTGGA ATGTGTTCGC GCTGTTGAAG
CGCCCGCCGG TGGCGTGGGG CATGGTGGGC GTGAGCCTGT TCTTCATGGG CCAGTTCTCG
CTGTTCACCT ACCTGCGCCC ATTCGTGGAA GGCACGCTGC ACGTATCGCC TTCGACGTTG
TCGCTGTTGC TGCTGTTGAT GGGTGCTGCA GGCTTGGCCG GCACGTTGTT GATCGAGCCC
TTCGTGCACA AGGCACTGTT CCGCACGCTG GTGCTGCTGC CCGCACTGAT GGCCGTGGTG
GCTGTGTGCA TGATCCTCAT CGGCAACACG CTGCCGAGGG TGGCGGTGTT GTTCGCCCTG
TGGGGCCTGC TTGGCACGTC GGCGCCCGTG GCCTGGTGGT CGTGGCTGGC CCGCACCCTG
CCCGATGACG GCGAGGCAGG CGGCGGCCTG ATGGTGGCCG TGGTGCAGAT GGCCATCGCC
ATCTGCGCCA CCGTGGGCGG CGTGCTGCTG GACCACCAGG GCTACCGCGC CACGTTCTGG
TTCAGCGCTG TCCTGCTGCT GGGCTCGGTA GTCACGTCCT GCATCGCTGC GCGCTCGGCG
CAGCACCATC GCCTTCCTGT CCATTCCTGA
 
Protein sequence
MSSLNLPPAG AGTAAPARSA TPREWGAVLA LTLGAFALVA SEFMPISLLT PIATDLRVSE 
GQAGQAIAVS GAFALVTSLL VSPLAGQLDR KWLLLGLTTA MILSGTLAAL APSFPVFMLG
RALIGVAIGG FWAMSAATAM RLVPSHQVPR ALAIVNGGNA LATVIAAPMG SYFGAIIGWR
GAFFSLVPVA VVALLWKIAA LPSMKATAGR TSWNVFALLK RPPVAWGMVG VSLFFMGQFS
LFTYLRPFVE GTLHVSPSTL SLLLLLMGAA GLAGTLLIEP FVHKALFRTL VLLPALMAVV
AVCMILIGNT LPRVAVLFAL WGLLGTSAPV AWWSWLARTL PDDGEAGGGL MVAVVQMAIA
ICATVGGVLL DHQGYRATFW FSAVLLLGSV VTSCIAARSA QHHRLPVHS