Gene Smal_2009 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_2009 
Symbol 
ID6476187 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2248194 
End bp2250836 
Gene Length2643 bp 
Protein Length880 aa 
Translation table11 
GC content67% 
IMG OID642731191 
Productexcinuclease ABC, A subunit 
Protein accessionYP_002028396 
Protein GI194365786 
COG category[L] Replication, recombination and repair 
COG ID[COG0178] Excinuclease ATPase subunit 
TIGRFAM ID[TIGR00630] excinuclease ABC, A subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATA CCCCCTTTGG TGAGTCGTCA TGTGCTGCCG CCGCCAGCGG TTGCGTCGAG 
GTGCGCGGCG CACGCGAGCA CAACCTCAAG AATGTCGACG TCTCCATCCC GCGCAATGCA
CTGGTGGTGT TTTCCGGGGT GTCGGGTTCC GGCAAGTCAT CGTTGGCCTT CGGTACCGTC
TTCGCTGAAG CGCAGCGGCG TTACTTCGAG TCCGTGGCAC CCTATGCGCG CCGCCTGATC
GACCAGGCGG GCGTGCCCGA TGTGGATGCC ATCGACGGGC TGCCGCCGGC GGTGGCCCTG
CAGCAACAGC GCGGGGCCAG CAACGCACGT TCATCGGTGG GCAGCGTGAC TACGCTGTCC
AGCCTGGTGC GCATGATGTA CTCGCGTGCC GGTGCGTACC CGGCCAACCA GCCCATGCTG
TACGCCGAGG ACTTCTCGCC CAACACGCCA CAGGGTGCCT GCAGCACCTG CCATGGCCTG
GGGCATGTCT ACGAAGTGAC CGAAGCGCTG ATGGTTCCGG ACCCCTCGCT GAGCATCCGC
GAGCGCGCCA TCGCCTCTTG GCCGCCGGCA TGGCATGGCC AGAACCTGCG CGACATCCTG
GTCACGCTGG GCTACGACAT CGACGTGCCG TGGAAGAAGT TGCCGAAGAA GGATCGGGAC
TGGATCCTGT TCACCGAGGA AGCGCCCAGC GTGCCGGTCT ATGCCGGTTT CACGCCCGCA
GAGACCCGTG CCGCACTCAA GCGCAAGCAG GAGCCCAGCT ACATGGGCAC CTATACCGGC
GCGCGGCGTT ACGTGCTGCA CACCTTTGCC AACACCCAGA GCGCGCTGAT GCGCAAGCGC
GTTTCCCGCT ACATGGAAGG CCGGTTGTGC CCGGCCTGCC ATGGAAAACG CCTGAAGCCG
GAGGCGCTCT CGGTCACCTT TGCCGGCGTG GATATCGGCG AGTTCATGCG GCTGCCGCTG
GACCAGCTGG CGGCGCTGCT GGAGCCCATC GCACAAGGTG ATTTCGGCGC GCACAGCAAG
GGCGCTCGCG CCAGCAGGAG CGCGACACCC CGCGATCGCG CCCGGAGGGC CGCGAGTGGC
CAGGCGACCC ACGAGGGTGC TCCCGACGTG CGCCTGACCT CCGCCCTGTC CGAAGAGAAG
CGCCTGGCGG CACAACGATT GGCAGGCGGT GTGATGGCGC GGGTACGCCA GCTGCGTGAC
CTGGGCCTGG GCTATCTCTC GCTGGACCGT GCGACGCCAA CCCTGTCAGC CGGCGAACTG
CAGCGCCTAC GGCTGGCCAC CCAGCTCAGT TCCTTGCTGT TTGGTGTGCT GTACGTGCTT
GATGAACCCT CGGCCGGCCT GCATCCGGCC GACAGCCAGG CGCTGTACGA CGCACTGGAA
CGGCTGCGCG ACGGCGGCAA CTCGGTGTTC GTTGTTGAAC ACGATCTGGA GCTGATGCGC
CGCGCGCAGT GGCTGGTGGA CGTTGGGCCA GAGGCGGGCG AGCATGGTGG CCAGGTCCTC
TACAGTGGCG AGCCCGACGG CCTGCGCAAG GTTCAGGAGT CGCGCACGGC GCGGTATCTG
TTCGATCAGG TGCCTGCGCC CGCCAGCCAG CAGCGCAGCG CCACCCGCTG GCTGGAACTG
AAGGGTATCC ACCGCCACAA CCTGCAGGGC GTGGACGCAC AGGTGCCGCT GGGGCTGCTG
ACGGCGGTGA CCGGTATTTC CGGCTCCGGC AAGTCCAGCC TGATGGCGCA GGCGCTGCCC
GAGCTGTTGC TGCTGCACCT TGGGCATGAG CCTGCGGACG ACAGCGCCGA CAGCACTCCC
ACCGACGGGC CGACCGTGAT CGAAACGACG CGGGGCACAT TGGCAGGCGA CATGGACGCC
ATCCAGCGGG TGGTGCAGGT CGACCAGAAG CCCATCGGCC GCACGCCACG CTCCAACCTG
GCCACCTATA CCGGGCTGTT CGATCACGTG CGCAAGCTGT TCGCCGCGAC ACCCGCCGCG
CGCCGCCGCC GTTTCGATGC GGGCCGCTTC TCGTTCAACG TGGCCAAGGG CCGGTGCGAG
ACCTGCGAGG GCGAGGGTTT CGTCAGCGTC GAACTGCTGT TCATGCCCAG CGTCTATGCG
CCTTGCCCCA CCTGCCATGG CGCCCGTTAC AACGACGCCA CGCTGAAGGT GCAGTGGAAT
GACCGCAACA TCGCCGAGGT CCTGCAGATG ACGGTCGACC AGGCGCATGC GTTCTTCAGC
GAGGAAGAGG CCATTGCCCG CCCGCTGCAG TTGCTGCAGG AAATCGGCCT GGGCTACCTG
CGGCTGGGCC AGCCAGCCAC GGAGCTTTCA GGCGGTGAGG CGCAACGCAT CAAGCTGGCC
ACCGAGCTGC AGCGCAGCCA ACGCGGGCGC ACGCTGTACG TGCTGGACGA ACCCACCACC
GGCCTGCATG CATCGGATGC GGACAGGCTG CTGGTGCAAC TGCAGCGGCT GGCGGACGCG
GGCAATACAG TGGTGATGAT CGAGCATGAC ATGCGCGCCG TTGCACAGGC GGACTGGGTG
ATTGATGTAG GCCCCGGAGC TGGCGGGGCA GGGGGCACCA TCGTGGCGAA GGGAACGCCG
CAACAGGTGG CGCGCGCGAA AGTCAGCAGG ACGGCGCCAT TTCTTGCGCG GGAGCTGGGG
TAG
 
Protein sequence
MSNTPFGESS CAAAASGCVE VRGAREHNLK NVDVSIPRNA LVVFSGVSGS GKSSLAFGTV 
FAEAQRRYFE SVAPYARRLI DQAGVPDVDA IDGLPPAVAL QQQRGASNAR SSVGSVTTLS
SLVRMMYSRA GAYPANQPML YAEDFSPNTP QGACSTCHGL GHVYEVTEAL MVPDPSLSIR
ERAIASWPPA WHGQNLRDIL VTLGYDIDVP WKKLPKKDRD WILFTEEAPS VPVYAGFTPA
ETRAALKRKQ EPSYMGTYTG ARRYVLHTFA NTQSALMRKR VSRYMEGRLC PACHGKRLKP
EALSVTFAGV DIGEFMRLPL DQLAALLEPI AQGDFGAHSK GARASRSATP RDRARRAASG
QATHEGAPDV RLTSALSEEK RLAAQRLAGG VMARVRQLRD LGLGYLSLDR ATPTLSAGEL
QRLRLATQLS SLLFGVLYVL DEPSAGLHPA DSQALYDALE RLRDGGNSVF VVEHDLELMR
RAQWLVDVGP EAGEHGGQVL YSGEPDGLRK VQESRTARYL FDQVPAPASQ QRSATRWLEL
KGIHRHNLQG VDAQVPLGLL TAVTGISGSG KSSLMAQALP ELLLLHLGHE PADDSADSTP
TDGPTVIETT RGTLAGDMDA IQRVVQVDQK PIGRTPRSNL ATYTGLFDHV RKLFAATPAA
RRRRFDAGRF SFNVAKGRCE TCEGEGFVSV ELLFMPSVYA PCPTCHGARY NDATLKVQWN
DRNIAEVLQM TVDQAHAFFS EEEAIARPLQ LLQEIGLGYL RLGQPATELS GGEAQRIKLA
TELQRSQRGR TLYVLDEPTT GLHASDADRL LVQLQRLADA GNTVVMIEHD MRAVAQADWV
IDVGPGAGGA GGTIVAKGTP QQVARAKVSR TAPFLARELG