Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_2000 |
Symbol | |
ID | 6476178 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2239818 |
End bp | 2240699 |
Gene Length | 882 bp |
Protein Length | 293 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642731182 |
Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
Protein accession | YP_002028387 |
Protein GI | 194365777 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family [TIGR02957] RNA polymerase sigma-70 factor, TIGR02957 family |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACGATT CCACTGCGCT GTTCTCCCGC CTCCGCCCAC GCCTGTTCGG CGTGGCCTAC CGCATGCTTG GGTCTTCGCA CGAAGCCGAG GACGTGGTGC AGGACGTCTG GCTGCGCTGG CATGGCGCCG ATCAGTCACA GATCGAGAAT CCCGAAGCCT GGCTGGTCGC CACTACCACC CGTCGCGCCA TTGATGGCCT GCGCCTGGCA CGGCATACGC GCGAACATTA TGTCGGCATG TGGTTGCCCG AGCCGCTGCT GACCGATGAC ACCAGCACCC CTGAATATGT ACTGGAAACC GCCAGCGATC TGTCGGTCGC CTTCCTCAGC GTGCTCGAAC GGTTGGCGCC GGATGCGCGT GCGGCCTTCC TGCTGCACGA CGTGTTCGAT CAGGACTACG CGGTGGTCGC GCGCACCCTG GACAAGACAG AAGCCGCCTG CCGGCAGATT GTGCATCGTG CACGCCTGCA GCTCAGGCAG GAGCGCCCGC GCTACAACGT CCCGCAGGAC GTGCACCAGA AATTGCTGCG CCGTTTCGCC GAGGCCGCAT CCAGTGGCGA TTTCCGCACG ATGAAGGCGC TGATGGCCGA GTCGGCCGAG CTGGTGGGTG ACGGCGGCGG CATCGTCACC AGCTTCCCCA AACCGATGGT CGGGGGCGCA CGCATTGCCC AGCTGCTGTA CGCCCCGCAC CTGCGGCGCA GCGCGCAATT GCGGATGGTG CCGGCCATGC TCAACGGACG GCTGGGACTG CTGCGCTATT TCGATGGCGA GCTGGAAGCG GCGATGGCCT TCGAGACCGA TGGCGAACGG ATCACGCAGA TCCTGGTGCA GCGCAACCCG CACAAGCTGC AGCGGCTGGC ACTGCCCACC TCGATTCAGT AG
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Protein sequence | MDDSTALFSR LRPRLFGVAY RMLGSSHEAE DVVQDVWLRW HGADQSQIEN PEAWLVATTT RRAIDGLRLA RHTREHYVGM WLPEPLLTDD TSTPEYVLET ASDLSVAFLS VLERLAPDAR AAFLLHDVFD QDYAVVARTL DKTEAACRQI VHRARLQLRQ ERPRYNVPQD VHQKLLRRFA EAASSGDFRT MKALMAESAE LVGDGGGIVT SFPKPMVGGA RIAQLLYAPH LRRSAQLRMV PAMLNGRLGL LRYFDGELEA AMAFETDGER ITQILVQRNP HKLQRLALPT SIQ
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