Gene Smal_1984 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1984 
Symbol 
ID6476091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2226163 
End bp2226696 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content64% 
IMG OID642731166 
Productprotein tyrosine phosphatase 
Protein accessionYP_002028371 
Protein GI194365761 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.565539 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.702205 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTACCC TGAATGTTCT GTTCCTCTGC ACAGGCAACT CGGCGCGCAG CATTCTTGCC 
GAAGCACTGG CCAACCATTT AGGGCGTGAA CGTATCCGCG CTTACAGTGC CGGCAGTCAC
CCCAAAGGCG TAGTTCATCC AGTTGCCCTG CAGGTGCTCT CAGAGATTGG GTTCGACGTT
GCCGGGCTGT CCAGCAAGCC GTGGGAGGCA TTCGCAGATC CGGAAGCACC GCAGATGGAT
CTCATCGTGA CCGTGTGCGA TCGCGCCGCG GGTGAAGCGT GTCCAGTGTG GCCAGGTCAC
CCGGTTACCG CCCACTGGGG TATCCCCGAC CCGGCCGCAG TGCAGGGCAG CGCGGAGCAG
GTCCACAAGG CGTTCCTCAG CACGCTTCAC CAGCTCCAGC ACCGTCTGGG ACTGCTGTTG
GCGCTCAAGC CTGAAGCGCT GGACCGCATG ACCCTGCAAT CGCAGGTGCG GGCGCTCGGC
AATGGCGCCG AGGCTCACGC GCCAGATGAC AGCGGAGAAA CAGCCCCGAC GTAG
 
Protein sequence
MRTLNVLFLC TGNSARSILA EALANHLGRE RIRAYSAGSH PKGVVHPVAL QVLSEIGFDV 
AGLSSKPWEA FADPEAPQMD LIVTVCDRAA GEACPVWPGH PVTAHWGIPD PAAVQGSAEQ
VHKAFLSTLH QLQHRLGLLL ALKPEALDRM TLQSQVRALG NGAEAHAPDD SGETAPT