Gene Smal_1983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1983 
Symbol 
ID6476090 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2225117 
End bp2226202 
Gene Length1086 bp 
Protein Length361 aa 
Translation table11 
GC content64% 
IMG OID642731165 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_002028370 
Protein GI194365760 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG2072] Predicted flavoprotein involved in K+ transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.264331 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.635094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCG TCGATGTGGT GGTGATCGGA GGTGGGCAGG CGGGTCTTTC GGCTGGCTAC 
TTCCTGCGTC GCAGCGGGCT GTCCTATGTG ATTCTTGATG CTGAAACGTC ACCTGGTGGG
GCGTGGCAGC ATGCGTGGAA ATCCTTGCAT CTGTTCTCGC CGGCGGGCTG GAGCTCGATT
CCCGGTTGGC CGATGCCCGC CACCCGGGAA CCGTACCCTT CGCAGGCGGA AGTGCTGGAC
TACCTCACGC GCTACGAGCA CAAATATGCA CTGCCCGTCA TCCGTCCCGT GCAGGTGGAA
CGCGTCAGTC GTTCGGGAAC CCGGCTGCTG GTGGAAGCAG ATGACGGCCG ACAGTGGCAT
ACGCGTGCAG TGATAAGCGC CACAGGTACC TGGCAGCATC CCTACACGCC CGACTATGAA
GGTATGGACG CATTCGGCGG CGTGCAGCTG CACTCGGCCC ACTACAGCCA TCCTGGATCC
TTTGCCGGAA TGCGCGTGGC GATCATCGGC AGCGGCAACT CAGGGGCACA GATTCTGGCC
GAGGTATCAA AGGTGGCCAA CACCACTTGG ATCACCCAAG GCAAGCCAGC CTTCCTGGCC
GACGATGTGG ACGGGCGCGT TCTGTTCGCA CGCGCAACCG AGAAGTGGAG GGCCCAGCAG
GAAGGCCGCG AACCGGATGT TCCGCAGGGT GGTTTTGGCG ACATCGTCAT GGTGCCGCCG
GTGGTGGATG CACGGCGCCG CGGTGTACTG GTCTCCATGC CGCCACCCGT CCGTTTCACC
GCCACCGGCA TACAGTGGGC AGATGGCAGC GAACGCAACT TGGACGCCGT GATCTGGTGC
ACCGGCTTCC GGCCGGCGTT GTCGTACCTG GAAGGAATGG GCATGGTCAA CGCCCTGGGT
CGGATCGACG TGGATGACAC CCAGGTCCGT TCGGTCGCAG AGCCGTCGGT CTGGCTGCTT
GGGTATGGCG ACTGGAATGG CGCAGCCTCG GCCACGCTGA TCGGGGTGAC CCGATACGCG
CGCGAGGCAG TAAGGCAAAT CAGCGACTAC GTCGGGGCTG TTTCTCCGCT GTCATCTGGC
GCGTGA
 
Protein sequence
MDSVDVVVIG GGQAGLSAGY FLRRSGLSYV ILDAETSPGG AWQHAWKSLH LFSPAGWSSI 
PGWPMPATRE PYPSQAEVLD YLTRYEHKYA LPVIRPVQVE RVSRSGTRLL VEADDGRQWH
TRAVISATGT WQHPYTPDYE GMDAFGGVQL HSAHYSHPGS FAGMRVAIIG SGNSGAQILA
EVSKVANTTW ITQGKPAFLA DDVDGRVLFA RATEKWRAQQ EGREPDVPQG GFGDIVMVPP
VVDARRRGVL VSMPPPVRFT ATGIQWADGS ERNLDAVIWC TGFRPALSYL EGMGMVNALG
RIDVDDTQVR SVAEPSVWLL GYGDWNGAAS ATLIGVTRYA REAVRQISDY VGAVSPLSSG
A