Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1980 |
Symbol | |
ID | 6476087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2222532 |
End bp | 2223023 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642731162 |
Product | protein tyrosine phosphatase |
Protein accession | YP_002028367 |
Protein GI | 194365757 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG0394] Protein-tyrosine-phosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.221335 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.141438 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCGTC GTGTTCTGTT CCTTTGTACC GGCAATTCCG CGCGCAGCGT GTTGGCCGAA TCGACCCTGA AAATGTGGGG CGAAGGCCGC TATCAGTCCT TCAGTGCAGG CAGCCAGCCA GCCGGTCGGG TCAATCCGTT CGCCATTGCC CAATTGCAGC GCGAGGGCTT CCCGGTGGAG GGCCTGCGCA GCAAGTCCTG GGACGAATTT GCCGAAGCGG ATGCTGCTGC CATGGATCTG ATTGTCACCG TGTGCGACAG CGCGGCCGCT GAGGCGTGCC CGGTTGTGTT TGGCGATTTC GTGCGCGTGC ACTGGGGCCT GTTCGACCCG GCCGGTGTGG AAGGCTCGGA TGCACAGAAG GCTGAAGCGT TCGACCGGGC ACATCAGATC ATCAAGGCCC GGCTGAAGGC CTTCCTGGAG ATTCCTGACG GGGCATGGGA TGACCGTGAG TCTCTCAAGG CCCAGCTTGA TCCGATTGCG CAGATCCACT GA
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Protein sequence | MTRRVLFLCT GNSARSVLAE STLKMWGEGR YQSFSAGSQP AGRVNPFAIA QLQREGFPVE GLRSKSWDEF AEADAAAMDL IVTVCDSAAA EACPVVFGDF VRVHWGLFDP AGVEGSDAQK AEAFDRAHQI IKARLKAFLE IPDGAWDDRE SLKAQLDPIA QIH
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