Gene Smal_1962 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1962 
Symbol 
ID6476069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2203945 
End bp2204430 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content65% 
IMG OID642731144 
ProductTspO and MBR like protein 
Protein accessionYP_002028349 
Protein GI194365739 
COG category[T] Signal transduction mechanisms 
COG ID[COG3476] Tryptophan-rich sensory protein (mitochondrial benzodiazepine receptor homolog) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0355654 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAGGA GCACGCAAGG AGTTGGCCTG CTGGGCTGGA TCGCGATCAC GTTTGCCGCC 
GCTGCGCTGG GCGCTTGGGC CTCGACGTCA GCCGCCAGCT TCTATGCCAG CCTCGTGCTG
CCCTCCTGGG CGCCGCCGGC CCGTGTGTTC GGTCCGGTGT GGACCCTGCT CTACGCGATG
ATGGCGATTG CGGCGTGGCT GGTCTGGCGT GAACGCGGCT GGCGCGGCGC CCGCCCAGCA
CTGTCGCTCT ATCTGTTGCA GCTGGCCATC AATGCACTAT GGAGCTGGCT GTTCTTCGGC
TGGAAGTTTG GCGCGCTCGC CTTCGCCGAC ATCCTGGTAC TGATCACGCT GGTGTGCACG
ACAATCGTTG TATTCGCGCG CATCCATCGC GGTGCCGCGG CGATGCTGCT GCCTTATCTG
GCCTGGATAT CGTTCGCCGC TGCGCTGAAC TTTTCGGTGT GGCAGGCCAA TCCGGCGGCA
CTGTGA
 
Protein sequence
MKRSTQGVGL LGWIAITFAA AALGAWASTS AASFYASLVL PSWAPPARVF GPVWTLLYAM 
MAIAAWLVWR ERGWRGARPA LSLYLLQLAI NALWSWLFFG WKFGALAFAD ILVLITLVCT
TIVVFARIHR GAAAMLLPYL AWISFAAALN FSVWQANPAA L