| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1961 |
|---|
| Symbol | |
|---|
| ID | 6476068 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | + |
|---|
| Start bp | 2203232 |
|---|
| End bp | 2203915 |
|---|
| Gene Length | 684 bp |
|---|
| Protein Length | 227 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 642731143 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_002028348 |
|---|
| Protein GI | 194365738 |
|---|
| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.0400694 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGAAA TGCGCGTGCT GTTGACCGGT GTCGCGGGGC TGGTGGGGCA GGGCGTGGCC
ATGGCTTGCC AGGCTTCGCC AAGGGTTGCC AGCCTGACCG CTCTGGTCCG GCATCGAGGC
AGCCTTGCCG GCCCCGGTGA CGAACTGGTA GTGCCGGACT TCCTGCGCAT CAATGAGCAG
CGCGATGATC TGGCTGGCTA CGACGCCTGC CTGTACTGCG CAGGCGCGCC ACCTGTGGGC
ACTGCCGAGG CTGAGTACCG GCGGGTGACC CTGGATACCA CGCTCGCCGT CGCGTGCGCC
TGGGCCGCTG CGAATCCCCG CGGTTGTTTC CTGTATGTGT CTGGCGCAGG CGCGGACCCG
CAAAGTCGGA TCATGCCGCT GCGGATCAAG GGCGAAACCG AGCAGGCATT GCGTGCGTTA
TCGATCCGGG CAGTCATGCT ACGCCCTGGT GGCGTCCGCC CGGTGCCTGG CACCGGTACC
CGGCATGCCG CGCTGAAGCC GTTGTACTGG GGCGGTGCAC CGCTGATGAA ACTGGCAGGG
GTGATTACCC CTGGGCTGGT GACCAGCAAT CTTGCACTGG GCCAGGCGAT GATCGCGCTG
GCCGGCATGA GCAACCCGCC CGCGACGGTG GAGTGCGCTC AGATCAACCG GATCGCCGCT
GGCGAAGGCG ACCCGGTGGC CTGA
|
|---|
| Protein sequence | MKEMRVLLTG VAGLVGQGVA MACQASPRVA SLTALVRHRG SLAGPGDELV VPDFLRINEQ
RDDLAGYDAC LYCAGAPPVG TAEAEYRRVT LDTTLAVACA WAAANPRGCF LYVSGAGADP
QSRIMPLRIK GETEQALRAL SIRAVMLRPG GVRPVPGTGT RHAALKPLYW GGAPLMKLAG
VITPGLVTSN LALGQAMIAL AGMSNPPATV ECAQINRIAA GEGDPVA
|
|---|
| |