| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1959 |
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| Symbol | |
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| ID | 6476066 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | + |
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| Start bp | 2201910 |
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| End bp | 2202533 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642731141 |
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| Product | RNA polymerase sigma factor RpoE |
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| Protein accession | YP_002028346 |
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| Protein GI | 194365736 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.0394591 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTACCCTG ACGCCGCCAG CCCCGCCTTC AACTTCGATA GCGTACGCAT CGTGTCCAGT
TCCCAGCAGC CGAGCAGCGA GCCGACGAAC TGGGCCGGTG ACATGGACGG TGTGGCGCGG
CTGCGCGACC GCGATTGCTT CATGCGCATC TACGATCATT TCATGCCGCG CCTGTGTGTC
TATCTGCGCG GTCTGGGTGC GCCCGAGGCA GTGGCCGAGG AGCTCGCGCA GGAGTGCCTG
CTGCGGCTGT GGCTGCGCGC AGCCGACTAC GACCCGGCGC AGGCAGCGCT GAGTACCTGG
CTGTACCGCA TCGCGCGCAA CCTGCATATC GACCGGGTAC GGCGTGAGCG CAGCTGGATA
CAGGTGCAGG CCGCGGTGGA GTACGCAGCG ACGGCAGACG TGGTCGAGCG CAGCAGCGCC
GAGCAGTTCG CTGACCAGGC CCGGCTGCGC CAGCGCATCA ATGAGCTGCC TGCGGTGCAG
GCGCGCCTGG TCCGCATGTC CTATTTCGAG GCCAAGAGCC ACGGCGAGAT CGCCGAAGCG
CTGGGAATGC CGCTGGGCAC GGTCAAATCG CATCTGCGGC GCGCGTTCCT GCAGTTGCAA
TCCAAGGTGG GGGGCGCGCT GTGA
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| Protein sequence | MYPDAASPAF NFDSVRIVSS SQQPSSEPTN WAGDMDGVAR LRDRDCFMRI YDHFMPRLCV
YLRGLGAPEA VAEELAQECL LRLWLRAADY DPAQAALSTW LYRIARNLHI DRVRRERSWI
QVQAAVEYAA TADVVERSSA EQFADQARLR QRINELPAVQ ARLVRMSYFE AKSHGEIAEA
LGMPLGTVKS HLRRAFLQLQ SKVGGAL
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