| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1957 |
|---|
| Symbol | |
|---|
| ID | 6476064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2199980 |
|---|
| End bp | 2200930 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 642731139 |
|---|
| Product | Stearoyl-CoA 9-desaturase |
|---|
| Protein accession | YP_002028344 |
|---|
| Protein GI | 194365734 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1398] Fatty-acid desaturase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.0747957 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTCTG TAGCGCCCCT TCCCCGCCGA CGCCGCCGTT TCCTGCGTAC ATTGAAGCGC
TGGATCGACA CCGGCAGCGG TGCAGATGCC AGCGCGGGCC AGCCGGGCCG CATTGATTGG
CTGCGTGCGG TGCCATTCGC GTTGATGCAC GTAGCTTGCC TGGCGGTGAT CTGGGTCGGC
ATCTCGTGGA CCGCGGTGAT CATGGCCGTT GCACTCTACG CAGTGCGGAT GTTCGCGATC
ACCGCGTTCT ACCACCGCTA CTTCTCGCAC CGCACCTTCC AGGCGTCGCG ACCAGTGCAG
TTCGTGTTCG CGGTGATCGG TGCCGCCAGC GTGCAGCGCG GGCCGCTGTG GTGGGCCGCC
CATCACCGCC ACCACCATCG CCATGCCGAC CAACCCCTGG ACCCGCACTC ACCGCGCGAA
GGGGGTTTCT GGCGCAGCCA CATGGGCTGG TTCCTGACCC GTGAGGCCTT TGCCACCGAT
CTTTCACGGG TACCCGATCT TGCCCGCTTC CCGGAACTTC GCTGGCTGGA CCGCTTCGAT
ACCGCGGTGC CGGTGCTGCT GGCCGCCGGT CTCTATGCGC TGGGTGCCGC GCTTGAACGC
TGGGTACCCA CACTGCACAC CTCCGGACCA CAGCTGCTGG TCTGGGGCTT CTTCATCTCC
ACCGTGGTGC TGTTCCATGC CACGGTCACC ATCAATTCAC TGGCGCACCG GTTCGGCCGC
CGCCGCTTCG AGACCCGCGA CGACAGCCGC AACAATCTCT GGCTGGCACT GCTCACCTTC
GGCGAAGGCT GGCACAACAA TCACCACTTC TTCCCGGGCA CGGTCCGCCA GGGCTTCCGC
TGGTGGGAGA TCGACCTGAC CTGGTACGGA CTGCGTGCAA TGTCCGCGGT CGGCCTGGTC
AAAGGACTCA AGCCGATTCC CGAATGGGTA TTGGCCAAGG CGAGGTACTG A
|
|---|
| Protein sequence | MASVAPLPRR RRRFLRTLKR WIDTGSGADA SAGQPGRIDW LRAVPFALMH VACLAVIWVG
ISWTAVIMAV ALYAVRMFAI TAFYHRYFSH RTFQASRPVQ FVFAVIGAAS VQRGPLWWAA
HHRHHHRHAD QPLDPHSPRE GGFWRSHMGW FLTREAFATD LSRVPDLARF PELRWLDRFD
TAVPVLLAAG LYALGAALER WVPTLHTSGP QLLVWGFFIS TVVLFHATVT INSLAHRFGR
RRFETRDDSR NNLWLALLTF GEGWHNNHHF FPGTVRQGFR WWEIDLTWYG LRAMSAVGLV
KGLKPIPEWV LAKARY
|
|---|
| |