| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1956 |
|---|
| Symbol | |
|---|
| ID | 6476063 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stenotrophomonas maltophilia R551-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011071 |
|---|
| Strand | - |
|---|
| Start bp | 2198701 |
|---|
| End bp | 2199978 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 642731138 |
|---|
| Product | amine oxidase |
|---|
| Protein accession | YP_002028343 |
|---|
| Protein GI | 194365733 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2907] Predicted NAD/FAD-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 0.130753 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCATCG CGATCATCGG CTCCGGCATT GCAGGCCTGG CCAGCGCCTG GTGGCTGCAC
GGCGAACATG AAGTCACGCT GTTTGAAGCC AATGACTACC TCGGCGGGCA TACCCACACC
CATGACGTGC AGGTGGGCGG CCGGCGCATG GCCGTGGATA CCGGCTTCAT CGTCTTCAAC
CCGCGGCACT ATCCGCTGCT GACCGCCTTG TTCGATGAGC TGGACGTGGC CTCGCAGCCG
ACCACGATGA GCTTTTCAAT GCACAGCGAG CGCAGCGGCG TGGAATACAA CGCCACCTCG
CTGGACGGCC TGTTCTGCCA GCGCCGCAAC CTGCTGTCGC CGCGCTTCTG GGGCATGCTG
GCCGACCTGC GCCGCTTCTA CCGCGATGCG CCGCTGCTGC TGGCGGAAGA CCAGGGCCCT
ACGCTGGGCC AGTACCTGCG CGACCAGCAC TATGGTGACG CCTTCATCGA GGAGCACCTG
CTACCGATGG CGTCGGCGCT GTGGTCTTCA CCAACCGCCA CCGTGATGGA CTTCCCGGCC
CGCTATCTGG CCCAGTTCAT GGCCAACCAC CAGATGCTGC AGATGACCGG GCGTTCGCCG
TGGCGTGTAG TCAAAGGCGG CTCTGCGCGC TATATCGAAG CCCTGCGCGC CCGCTGGCAG
GTGCGCGAAC GACTGGAGTG CCCGGTGCAT TCGGTCGAGC GCACGCCCTG GGGCGCGCGG
GTGCACAGTA CGGCCGGCGT GGAAGGCTTC GACGAGGTGA TCCTGGCCTG CCATAGCGAC
CAGGCACTGG CGCTGCTGGG TGACGCCGAT GCCATCGAGC GCGAGGTGCT CGGTGCCATC
CGCTACCAGC CCAACGAAGC CGTGCTGCAC ACCGATGCAT CACTGCTGCC GCGCGAGCGC
AAGGCCTGGG CCGCCTGGAA CGCGCACGTG CCGCGCGACC CCGCCGCGCC GTGCACGGTC
AGTTACTGCA TGAACCTGCT GCAGGGCCTG CCCGGTGACA CTCCGCTGGT AGTGACCCTC
AACCGCAGCG AGGCGATCGA CCCGGCCAAG GTGCTGCGTA CGCTGCACTA CGCGCACCCG
GTACATGACC ATGCCGCAGT CCGGGCGCAG CAGCGCTGGG GCGAGCTGCA GGGCCGGCGC
CATACCTGGT TCGCCGGTGC CTATTGGGGC TGGGGCTTCC ATGAAGACGG CATCCGCAGT
GCCCGACGTG TGGTGGACGC ACTGCGTGCC TGCGAACCGC ATCGATTGGC GCCGGCGTTC
GGCGAGGTCG CCGCGTGA
|
|---|
| Protein sequence | MRIAIIGSGI AGLASAWWLH GEHEVTLFEA NDYLGGHTHT HDVQVGGRRM AVDTGFIVFN
PRHYPLLTAL FDELDVASQP TTMSFSMHSE RSGVEYNATS LDGLFCQRRN LLSPRFWGML
ADLRRFYRDA PLLLAEDQGP TLGQYLRDQH YGDAFIEEHL LPMASALWSS PTATVMDFPA
RYLAQFMANH QMLQMTGRSP WRVVKGGSAR YIEALRARWQ VRERLECPVH SVERTPWGAR
VHSTAGVEGF DEVILACHSD QALALLGDAD AIEREVLGAI RYQPNEAVLH TDASLLPRER
KAWAAWNAHV PRDPAAPCTV SYCMNLLQGL PGDTPLVVTL NRSEAIDPAK VLRTLHYAHP
VHDHAAVRAQ QRWGELQGRR HTWFAGAYWG WGFHEDGIRS ARRVVDALRA CEPHRLAPAF
GEVAA
|
|---|
| |