Gene Smal_1954 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1954 
Symbol 
ID6476061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2196681 
End bp2197940 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content66% 
IMG OID642731136 
ProductCyclopropane-fatty-acyl-phospholipid synthase 
Protein accessionYP_002028341 
Protein GI194365731 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2230] Cyclopropane fatty acid synthase and related methyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0822929 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAGA TGAATCCCTC GGTAGCCCTG CCACAGCCGG GCACGCTCGA CGTTTTCCTG 
CGCCGCCGCC TGCTGGCGCA GCTGGCGCCC CTGCGCGACG GCCGTCTGTG CGTGCGCGAT
GCGCTCGGCG AGGTCTGGCT GGGCGAAGCC CGCGGTGATC TGCAGGTCAC GGTCACCATC
GACGACCCGG CGTTCTACCG AAAAGTGGCT GCACAGGGCA GCGTCGGCGC TGGCGAGAGC
TACATCCACG GCGACTGGCA CTGCGATGAT CTGGTGGCCC TGGTGCGCCT GCTGGTACGC
AACCGCGATC TGCTTGACAG CATGGAGCAC GGCCCCGCCC GCGTGGGCGG CTGGCTGCTG
CGCGGCTGGA ACCGCCTGCG CCGCAACAGC CGCGAAGGCA GTCGTCGCAA CATCGCGGCG
CACTACGACC TCGGCAACGA TTTCTTCGCG TTGTTCCTGT CGCCGGACCT GATGTACTCC
TCGGCACTCT TCGCCGATGA CAGTGAATCG CTGGAGACGG CATCGCGACG CAAGCTGGAC
CGCATCTGCC AGCAGCTGCA GCTCAAGCCC GGCGACCACG TGGTCGAGAT CGGCACCGGC
TGGGGCGGTT TCGCCGTGCA TGCGGCCCAG CACTATGGCT GTCACGTCAC CACCACCACC
ATTTCCGCCG AGCAGCACGC GCTGGCCACG GAACGTGTAA AGGCTGCCGG CCTGCAGGGT
CGGGTCACCC TGTTGATGCA GGACTACCGG GACCTGCAAG GCCGCTACGA CAAGCTGGTG
TCGATCGAGA TGATCGAAGC CATTGGTGCC GAGTACCTGG ACACCTACAT GGCCACGCTG
CAGCGCCTGC TGAAGCCGGA CGGCGTGGCG CTGCTGCAGG CCATCACCAT CGAGGACCAG
CGCTACGAAC AGGCGCGGCG GAGCGTTGAC TACATCAAAC GCTACGTATT CCCGGGCAGC
TTCATTCCCT CGATCAACGC GATCATGGCG GCCAAGACCC GGGCCAGCGA CCTGCAGCTG
ATCGCGCAGC AGGATTTCGG CCATTCGTAC GCGCTGACCC TGCGTGCATG GCGTCATCGC
TTCCTCGCCC AGCTGCCTGC GGTGCAGGCG CAGGGCTTCG ACGCGCGCTT CTGCCGTCTG
TGGGAGTTCT ATCTGGCGTA CTGCGAGGGG GGCTTCCTGG AGCGATCGAT CGGCGTGTCG
CATCTGTTGC TGGCGCGTCC GGGCCATCGA CCGATGGCGG CGGCGAGCGA TGGCCACTGA
 
Protein sequence
MNEMNPSVAL PQPGTLDVFL RRRLLAQLAP LRDGRLCVRD ALGEVWLGEA RGDLQVTVTI 
DDPAFYRKVA AQGSVGAGES YIHGDWHCDD LVALVRLLVR NRDLLDSMEH GPARVGGWLL
RGWNRLRRNS REGSRRNIAA HYDLGNDFFA LFLSPDLMYS SALFADDSES LETASRRKLD
RICQQLQLKP GDHVVEIGTG WGGFAVHAAQ HYGCHVTTTT ISAEQHALAT ERVKAAGLQG
RVTLLMQDYR DLQGRYDKLV SIEMIEAIGA EYLDTYMATL QRLLKPDGVA LLQAITIEDQ
RYEQARRSVD YIKRYVFPGS FIPSINAIMA AKTRASDLQL IAQQDFGHSY ALTLRAWRHR
FLAQLPAVQA QGFDARFCRL WEFYLAYCEG GFLERSIGVS HLLLARPGHR PMAAASDGH