Gene Smal_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1952 
Symbol 
ID6476059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2195349 
End bp2196134 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content66% 
IMG OID642731134 
Productprotein of unknown function DUF1295 
Protein accessionYP_002028339 
Protein GI194365729 
COG category[S] Function unknown 
COG ID[COG3752] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0634907 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAATC CAGGGTGGGT GCTGCTGTAC GCAGTAGTGG TAATGAGCTG GGGCTGGGCC 
TGGCAGCGCC GCCACACCAA CATCGGCGTG GTTGATGTGC TCTGGGCCAA AGGTGTCGGC
GCTTCCGCTC TGCTGCTGGC ACTGCTGGGC GATGGCGCGC TGATGCCACG GCTCGCGCTG
GGGCTGCTGG GTGGACTGTG GGGCAGCCGC CTGGCCTTGC ATCTCTGGCA CCGGGTCCGT
CACGAACAAG AGGACGGTCG CTACCGTTAT CTGCGGGAAC ACTGGCACGG CCACCAAGGG
AAAATCTTCG GCTTCTTCAT GGCGCAGGCG CTGCTGATCG TCCTGTTCGC CCTGCCCTTC
GTCGCGGTGG CGGCCAATCC AAGGCCGGGG CTGTCGCTGT GGGTGGTTGC CGGCGCAGGC
GTCTGGCTGC TCAGCGTCGG CGGTGAGGCG CTGGCCGACC GGCAGCTGGC CCGGTTCCGG
GCCGACCCGG CGAACAAGGG CCTGACCTGC CGCAAAGGGC TCTGGCGCTA CTCGCGCCAC
CCCAACTACT TCTTCGAATG GCTGCACTGG TTCAGCTACG TGCTGCTGGC GGTGGGCTCA
CCACTGTGGT GGCTGGCGTG GTCCGGCCCG CTGCTGATGT ATGTATTCCT GCGCTATCTG
AGCGGCATTC CGTTCACCGA GAAGCAGGCC CTGCGTAGCC GCGGTGAAGA CTACCGCGAG
TACCAGCGCA GCACGTCGAT GTTCTTTCCC TGGTTCCCCC GCACGTCCAA GGAGCATTCC
GCATGA
 
Protein sequence
MINPGWVLLY AVVVMSWGWA WQRRHTNIGV VDVLWAKGVG ASALLLALLG DGALMPRLAL 
GLLGGLWGSR LALHLWHRVR HEQEDGRYRY LREHWHGHQG KIFGFFMAQA LLIVLFALPF
VAVAANPRPG LSLWVVAGAG VWLLSVGGEA LADRQLARFR ADPANKGLTC RKGLWRYSRH
PNYFFEWLHW FSYVLLAVGS PLWWLAWSGP LLMYVFLRYL SGIPFTEKQA LRSRGEDYRE
YQRSTSMFFP WFPRTSKEHS A