Gene Smal_1943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1943 
Symbol 
ID6476050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2185194 
End bp2185955 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content68% 
IMG OID642731125 
ProductABC transporter related 
Protein accessionYP_002028330 
Protein GI194365720 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.82055 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.0334831 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTGT TGTTGAAGCT GCACGAGGTG GTGGTCCGTC GCCAGCAGCG CGAGATCCTG 
CACGGCATTT CGCTCGCGTT CGAACCGGGA ACGGTGACCG CGCTGGTCGG CCCGAATGGC
GCGGGCAAGT CCACGTTGCT GGCTGTGGCG GCAGGTGACC TGCGTGCCGA CGCTGGCGAA
GTAAGCCTGC TCGGCAAGCC GTTGGCTGGT TACAAGGCCG GGCCACTGGC GCGCGAGCGT
GCAGTGATGC CCCAGGAGCA CGGCGTGCGC TTCGCCTTCA GCGTGGAAGA AGTGGTTGCG
ATGGGGCGGC TGCCGCATCC GCCGGATCCA GCCGTGGACG ACGCCCAGGT GGAAGCGGCC
ATCGATGCCG CTGAACTGCA GGCGCTGCGC CTGCGCGAGG TGCAGCAGCT GTCGGGCGGT
GAATCGGCAC GGACCACGTT CGCGCGCGTG CTGGCGCAGG ACACGCCGCT GCTGCTGCTG
GATGAGCCAA CCGCAGCGCT GGATCTGCGT CACCAGGAAC GCACGCTGCG CAGTGTGCGC
GCCTGTGCCG AAGCCGGTGC GTGCGTGATC GTGGTGCTGC ACGACCTCAA TCTGGCCGCG
GGCTATGCCG ACCGCATCGT GCTGCTGGAG CAGGGCAGGG TGGCGGCCGA TGGCACGCCG
TTGCAGGTGC TCACCGAAGA CAACCTGCAG CGTGTCTACC AGCAGGATGT GGTGGTGCTG
GAGCACCCAA GGCGTGGGGT GCCACTGGTG GTGGTGACCT GA
 
Protein sequence
MSVLLKLHEV VVRRQQREIL HGISLAFEPG TVTALVGPNG AGKSTLLAVA AGDLRADAGE 
VSLLGKPLAG YKAGPLARER AVMPQEHGVR FAFSVEEVVA MGRLPHPPDP AVDDAQVEAA
IDAAELQALR LREVQQLSGG ESARTTFARV LAQDTPLLLL DEPTAALDLR HQERTLRSVR
ACAEAGACVI VVLHDLNLAA GYADRIVLLE QGRVAADGTP LQVLTEDNLQ RVYQQDVVVL
EHPRRGVPLV VVT