Gene Smal_1930 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1930 
Symbol 
ID6476037 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2168449 
End bp2169573 
Gene Length1125 bp 
Protein Length374 aa 
Translation table11 
GC content67% 
IMG OID642731112 
Productprotein of unknown function DUF482 
Protein accessionYP_002028317 
Protein GI194365707 
COG category[S] Function unknown 
COG ID[COG3146] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.207995 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTCCC CTCGCTTCCA CGACTCCCTG CAGTCCATTG CCGCCAGCAA CTGGGATGCC 
CTGCACGACG GCCGCAACCC CTTCATCAGC CACGCCTTCC TCTCAGGCCT GGAACAACAC
GGCTGCCTGC GCGAGGACTG GGGCTGGCAG CCCCGGCATT TCACGCTGTG GGAGGGCGAC
ACTCTGGTCG GCGCCATTCC GGGTTACCTG AAGACCAACT CGCACGGCGA ATTCGTGTTC
GATCACGCCT GGGCCAACGC GTATGCCCGT CATGGCCGCG ACTACTACCC GAAATGGCTG
GGCGCGGTGC CGTACTCGCC GGTCACCGGC CCGCGGCTGC TGGCCCGTCA CGATCCGGAG
CGCGCCACGT TGCTGTCGGC ATTGCGCGAA GCACTGCCGA CGCTGGGCGT GTCCTCGGCC
CATATCAACT TCCACACCGC GTTGGACGAG GCGCTGTTCG GCGATGACTG GCTGCTGCGC
GAGGATGTGC AGTTCCAGTG GCAGAACCCG GGCGACTGGA CCTCGTTCGA GCAGTTCCTC
GGCGCGATGG ACCACAAGCA CCGCAAGAAC ATCCGTCAGG AACGGGCCAA GGTCACGCGC
CAAGGCATCA CCTTCCGCGT GGTGCACGGC GATGAAGCGA GCCGCGCCGA TCTGCAGGCG
ATGTACCGCT TCTACCTGCA GACGTTCCTC GAGTACGGCA ATGCCCCGGC GCTGACCGAG
GCCTTCCTGC GCCATCTGGC GATTTCGCTG GGGCGCGGGC TGGTGCTGTT CCTGGCCGAA
CAGGACGGCG AGCCGATTGC CGGCGCGCTA TGCCTGCGGG GCGGAGACAC GCTGTACGGC
CGTTACTGGG GCGGCGCTAC CCTGCCCGGC CTGCACTTCG AGGCCTGCTA CTACCAGGGC
ATCGAGTATT GCCTGCGCGA AGGGCTGGCC CGCTTCGAGC CGGGCGCACA GGGCGAGCAC
AAGCTGGCGC GCGGTTTCCT GCCGACGCTG GTGCGCAGCC GGCACTGGAT GGCCGATGCG
GATTTCGCAG AAGCACTGCA GGACTGGTGC CGGCAGGAGC GGTGCGATGT GCGGCGCTAC
CAGCAGGAGC TGCAGGGGCA TGGGCCGTTC CGCGCAGGAA CGTAG
 
Protein sequence
MPSPRFHDSL QSIAASNWDA LHDGRNPFIS HAFLSGLEQH GCLREDWGWQ PRHFTLWEGD 
TLVGAIPGYL KTNSHGEFVF DHAWANAYAR HGRDYYPKWL GAVPYSPVTG PRLLARHDPE
RATLLSALRE ALPTLGVSSA HINFHTALDE ALFGDDWLLR EDVQFQWQNP GDWTSFEQFL
GAMDHKHRKN IRQERAKVTR QGITFRVVHG DEASRADLQA MYRFYLQTFL EYGNAPALTE
AFLRHLAISL GRGLVLFLAE QDGEPIAGAL CLRGGDTLYG RYWGGATLPG LHFEACYYQG
IEYCLREGLA RFEPGAQGEH KLARGFLPTL VRSRHWMADA DFAEALQDWC RQERCDVRRY
QQELQGHGPF RAGT