| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smal_1919 |
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| Symbol | mnmA |
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| ID | 6475944 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stenotrophomonas maltophilia R551-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011071 |
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| Strand | - |
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| Start bp | 2159022 |
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| End bp | 2160164 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642731101 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_002028306 |
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| Protein GI | 194365696 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.377705 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCACTC CGCGCGTAAT GGTCGGCGTC TCTGGTGGCG TCGATTCCTC GGTCGCTGCC
TGGCGGCTGG TGCAGCAGGG CGAAGCCGTG GCCGGCCTGT TCATGCAGAA CTGGGCCGAC
GACGGCAGCG GCGAGTGCCG CGCCGAGGAC GACCGCCGTG ATGCGGTGGC CGTGTGTGGC
CTGCTCGGCA TTCCGTTCCA CTTCCGCGAT TTCTCCAACG AATACTGGCA GGGCGTGTTC
GAGCACTTCC TGGCCGAGTA TGCCGCCGGC CGCACCCCGA ACCCGGACGT GCTGTGCAAC
CGCGAGGTGA AATTCAAGCA CTTCCTGGAT GCCGCCCGCG AGCTGGGCGC CGAGCGCATC
GCCACTGGCC ACTACGCGCG GGTGGCCCAG CGCGGCCACC AGTGGCTGCT GCTGCGCGGC
GCCGACCGCT CCAAGGACCA GAGCTACTTC CTGCACCAGT TGGGCCAGCA GCAGCTGGCA
GCGACCCTGT TCCCGATCGG CGACCTGGAA AAGACCGACC TGCGCCGGAT CGCGCGTGAC
GTCAGCCTGC CGACCCACGC CAAGAAGGAC TCCACCGGCA TCTGCTTCAT CGGCGAGCGC
GACTTCCGCG AGTTCCTTGG CCGCTACCTG CCGGCCAAGC CCGGGCAGAT CCTCGACCCG
GCCGACGGCA GCGTGATTGC CGAGCATCCA GGCGTGTTCT ATTTCACCCT GGGCCAGCGC
GAGGGCCTGA ACATCGGCGG CGTGCGTGGC CGCCCTGCGG CGCCGTGGTA CGTGGTCGGC
AAGGACGTGG CCAGCAACGT GCTGTACGTC GACCAGGATC GCGACAGCAC GTGGATGCTG
TCCAACCGCC TGCGCTCGGA GACCGCGCAC TGGATTGCCG GCGCGCCGCC GGCACGGCGC
TTCGAGTGCA CCGCGCAGAC CCGCTACCGC CAGCCCGACG AGCCGTGTAC GGTCGAGGTG
CTGGACGATG GCAGCGTACT GGTCACCTTC GCGCGCCCAC AGCGCGCCGT CACCCCCGGT
CAGTCGCTGG TGCTGTATGA CGGCGACGTG TGCCTGGGTG GCGCGGTGAT CGCCGCCACC
GATGCGCCGC TGGAACAGCG CCTGCGCACC ACCCCTTCTC CTTTTGAGGT AATCGCTGCA
TGA
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| Protein sequence | MSTPRVMVGV SGGVDSSVAA WRLVQQGEAV AGLFMQNWAD DGSGECRAED DRRDAVAVCG
LLGIPFHFRD FSNEYWQGVF EHFLAEYAAG RTPNPDVLCN REVKFKHFLD AARELGAERI
ATGHYARVAQ RGHQWLLLRG ADRSKDQSYF LHQLGQQQLA ATLFPIGDLE KTDLRRIARD
VSLPTHAKKD STGICFIGER DFREFLGRYL PAKPGQILDP ADGSVIAEHP GVFYFTLGQR
EGLNIGGVRG RPAAPWYVVG KDVASNVLYV DQDRDSTWML SNRLRSETAH WIAGAPPARR
FECTAQTRYR QPDEPCTVEV LDDGSVLVTF ARPQRAVTPG QSLVLYDGDV CLGGAVIAAT
DAPLEQRLRT TPSPFEVIAA
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