Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smal_1914 |
Symbol | |
ID | 6475939 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stenotrophomonas maltophilia R551-3 |
Kingdom | Bacteria |
Replicon accession | NC_011071 |
Strand | + |
Start bp | 2153263 |
End bp | 2156022 |
Gene Length | 2760 bp |
Protein Length | 919 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642731096 |
Product | diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
Protein accession | YP_002028301 |
Protein GI | 194365691 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
TIGRFAM ID | [TIGR00229] PAS domain S-box [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.321269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGACCAAG GGATCATCGC CAGCCTGCTG CAGCACCCGC TTGCGTCGGC GCTGGTCATC GTCGACCGCA CGGGCCGCCC GCTGGCGGCC AATCCGGCTG CGCGCGAGCA TGGCCTGCCG GCCACCGTGG CTGCGTACGC GCCGATGCTG GAAGATCTGC GCCTGTTGGC GGCCGATGGT GGCATCGTGG CCTGCACGCT TCCTGGCGGC CCGCGCGGGC ACTACGATGG CCACCTGCGC GCCGTGCACG ATGGCGCAGG CAACTTGCTG GCCTTCACGC TGAGCATCCC CGAGCCGGTG CCGGTCGATG GTGGCGGGCG CTGGGAACTG GCCTTGGACA GTGCCGGCCA CAGCTTGTGG GACTGGGACA TTCCCAGCGA CCGCGTAGTC CGCACGCCGG CGCTGGGTGA TGAAACCGCC ACCGAGATAC TGGCGCGCGT ACACAGCGAA GACATCGGCC AGGTCCGTGT CGCGCTGGAC CAGCACCTGC GTGGCCTGAG CGAGCAGTAC AGCGCCCAGT TCCGGTTCCG CCAGGCCGAT GGCCAATGGC GCTGGGTGCT TGATCGCGGT CGTGTGGTGG CGCGCACCGC CGACGGCCAG CCACTGCGCA TGGTCGGCAC GCATACCGAT ATCGAGCAGC AGAAACAGCT GGAAGGCCTG CTGCAGGAGC AGCAGCTGCA CCTGAGCGAG GCCCAGCGCA TCGCCAGCAT GGGCAGCTGG TCGTTCGACC CCGATAGTGG CCTGTTCTGG TGGTCGCCGG AGCTGCGTTC GCTGCTGTCG CTGGAGCAGG GCAGCGTGCC CGGCCAGCGG CGCTGGTTGA AACAGCTGCA TCCGCGCTCT CGTGGTGCGC TGCGTGCCGC CTGGCGGCGG GTATGGCGCG ATGGCCGCGC AGCCAACATC GAGCTGGAAC TGACTCGCGG CAACGAGCCC TCGCAGCACC TGCGGCTGTG GATGCAGCCG CTGCTGGACA CCGATGGCCA GCCCAAGCGC CTGCTCGGCC AGGTGCAGAA CATCACCGAG CAGCACCAGA CCGACGCGTT GATCCGCTGG CGCACCGAGC TGCTCAACCG TGTCTCCGCA CTGGGCCGCA TCGGCGGTTG CGAGATCGAA GTGCAGACCC GGCACATGCA GTGGACCGAG GAGTGCTACC GCATCCACGG CCTGCGCAAG GAGCCGATCA GCCTGGACCA GGCACTGGCG CTGTACACCG AAGATTCGCG CAGCGCCTTC GAGGCCGCAC TGGTGCGGAT TGCCGGCGGT GGCCTCCCCG AGCAGCTGGA CCTGTGCTTC TACCGCCAGT CCGGCCTGCG CGTGTGGGTG CAGGTGCTGA TCGAGCTGGA TCGCCGCGAT GGCCTGCCGC CGCGCTTCGT GGTCCTGTTC CGTGACATCA CCCGCGAGCG CGAGGCCAAC GAGCGCATCG AGCTGCTGGC GCACTACGAT CTGCTGACCG GCCTGCCCAA TCGCGTGCTG CTCGGCGAGC AGACGGCAGA AGCCATCGAG GAAGCGCGCG ACCGCGGCAC CTCGCTGGCG ATGCTGTTCA TTGATCTGGA CGGCTTCAAG ACCATCAACG ACAGCTTCGG CCACGCCACC GGTGATGCGC TGCTGAAGGC CGCGGCCACG CGCCTGCACC AGAACCTGCG CAACAACGAT CTGTTCGGCC GTTTCAGTGG CGACGAGTTC ATCGTGGTGT TGCGCGACCT GGCCGAGCCG GAAGACGCCG GCCACGTGGC GCGCAAGCTG ATCGCTTCGC TGGCCGAGCC GCTGCGCCGT GGCGACACCA CGCTGAAGGT CGGCGCCAGC GTTGGCATTG CGATGCTGGG TGACGCGCAG ACTGATTTCG ACTCGCTGCT GCGCGCCGCT GATGCCGCGA TGTACGCGGC CAAGGAAGCC GGGCGGAATA CCTACCAGTA CTACAGCCAG GACGCGCTGG CGCGTATCCA GCGTCGGCTC GAGCTCGAGC ACGCGCTGCA TGGCGCGATC GAACGCGAAG AGTTCAGCCT GGCCTACCAG CCGCTGCTGC ATGCGCATCA TGGCGAACCG CCGGCGATCG AGGCACTGTT GCGCTGGCAT CGGCCCGGCA TCGGCTACTG CAGCCCGGCC GAATTCATTC CGATTGCAGA GAAGTGCGGC GAGATCGTGC GCATCGGCGA CTGGGTGCTG AACGAAGCCT GCCGGCAGGC AATCGCCTGG GACCGGGCTG GCCTGTGTTT TGACCGCATC GCAGTCAATG TGTCGGCAGT GCAGCTGCGT GATCGCGGTT TTGCTGAGCG GGTGATCGAG ATCTGCCACG CCCACGGCTG GCCGCCGCAG CGGCTGGAGC TCGAGCTGAC CGAGTCGGCG TTGATCCGTG ACACCGACAT TCTGCGCCAC TGCTTCGACG TGCTGGAACG GCACGGCGTG CCACTGGCAG TGGATGACTT TGGTACCGGC TTCTCCAATC TGAACTACCT CAACCGTTTC CCGGTGGGGC GCCTGAAGAT CGACCGCAGT TTCGTGCAGG GCATGCTGCA TGATTCGGGT ACGGCCGAAG TGACCCAGGC CATCGTGCAC CTGGGCCACG CGCTGGGCAT GAAGGTAGTG GCCGAAGGCG TGGAAACGCA CCAGGAAGAA GACATGCTGC GCCGCCAGGG CTGCGACGAG ATCCAGGGCT ACCTGTACTC GCGCCCGCTC AGCCCGCGTG ACCTGGCGCA GTGGTTGCGA CAGCAGCACG CCGCGCCAGG GCGCACCGAT GCTGCCAGCG AGGCCGTGCT GGCACGCTGA
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Protein sequence | MDQGIIASLL QHPLASALVI VDRTGRPLAA NPAAREHGLP ATVAAYAPML EDLRLLAADG GIVACTLPGG PRGHYDGHLR AVHDGAGNLL AFTLSIPEPV PVDGGGRWEL ALDSAGHSLW DWDIPSDRVV RTPALGDETA TEILARVHSE DIGQVRVALD QHLRGLSEQY SAQFRFRQAD GQWRWVLDRG RVVARTADGQ PLRMVGTHTD IEQQKQLEGL LQEQQLHLSE AQRIASMGSW SFDPDSGLFW WSPELRSLLS LEQGSVPGQR RWLKQLHPRS RGALRAAWRR VWRDGRAANI ELELTRGNEP SQHLRLWMQP LLDTDGQPKR LLGQVQNITE QHQTDALIRW RTELLNRVSA LGRIGGCEIE VQTRHMQWTE ECYRIHGLRK EPISLDQALA LYTEDSRSAF EAALVRIAGG GLPEQLDLCF YRQSGLRVWV QVLIELDRRD GLPPRFVVLF RDITREREAN ERIELLAHYD LLTGLPNRVL LGEQTAEAIE EARDRGTSLA MLFIDLDGFK TINDSFGHAT GDALLKAAAT RLHQNLRNND LFGRFSGDEF IVVLRDLAEP EDAGHVARKL IASLAEPLRR GDTTLKVGAS VGIAMLGDAQ TDFDSLLRAA DAAMYAAKEA GRNTYQYYSQ DALARIQRRL ELEHALHGAI EREEFSLAYQ PLLHAHHGEP PAIEALLRWH RPGIGYCSPA EFIPIAEKCG EIVRIGDWVL NEACRQAIAW DRAGLCFDRI AVNVSAVQLR DRGFAERVIE ICHAHGWPPQ RLELELTESA LIRDTDILRH CFDVLERHGV PLAVDDFGTG FSNLNYLNRF PVGRLKIDRS FVQGMLHDSG TAEVTQAIVH LGHALGMKVV AEGVETHQEE DMLRRQGCDE IQGYLYSRPL SPRDLAQWLR QQHAAPGRTD AASEAVLAR
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