Gene Smal_1898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSmal_1898 
SymbolflgJ 
ID6475923 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStenotrophomonas maltophilia R551-3 
KingdomBacteria 
Replicon accessionNC_011071 
Strand
Start bp2137674 
End bp2138873 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content69% 
IMG OID642731080 
Productflagellar rod assembly protein/muramidase FlgJ 
Protein accessionYP_002028285 
Protein GI194365675 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1705] Muramidase (flagellum-specific) 
TIGRFAM ID[TIGR02541] flagellar rod assembly protein/muramidase FlgJ 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0283607 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCATCA CTCCCGCATT CGATCTGCAC CCGGCGCAAC AGAACGATCC GGCCAAGATC 
GACAAGGTCG CGCGCCAGCT GGAAGGCCAG TTCGCGCAGA TGCTGGTCAA GAGCATGCGT
GACGCCAGTT TTGGCGATTC GCTGTTCCCA GGCGAAAACA AGATGTTCCG CGACATGTAC
GACCAGAAGA TTGCCGAGGC GATGACCCGC GGCAAGGGCC TGGGCCTGTC GGGCATGATC
AGCCGCCAGC TGTCCGGGCA GGCCGCCGAA GGTCCGCCAC TGGATACCCG CGTGGACCCG
GCCAAGGCCA GCCGCGCCTA CCAGCTCAAC GCGCCGGCCA AGCCAGCACC GTCACTGCCA
CTGGAAGACG GCGGCCAGGC CGTGCGCCTG CTGCAGCAGA TGGCTGCCGG TGCCCAACAT
GGCGCCCAGG CCGCGGTTGC GCCGATGGAA CAGGCGCTGG ACCTGATCGC TGGCCGTGAA
AGCAGCAGCA TGCACCGCTC GCTGGGCACC GACGATCCGT ACATCGGCAG CCTGCAGGGC
GATGACTGGG CGGCCAGCAG CGACCAGTGG TCCGCAACGG CGAGCAATCG CGGTACGGCG
ATCAACCCGG CTGACGCGAT GGCCACCCGT ACCGCCGTGG CTCAGCTAGG CGAGCACACC
CCGGAAGGCT TCGTCGCCAG CATCTGGCAG CACGCGCAGA GCGCGGCCAA GGAACTGGGC
GTGGATGCCC GCGCCCTGGT GGCCCAGGCC GCACTGGAAA CCGGCTGGGG CAAGCGCCAC
ATCAAGCACG CCGACGGCAG CACCTCGCAC AATCTGTTCG GCATCAAGGC CAATGGCTGG
AACGGCCAGC GCGCCGTGGC CGGCACCCAC GAGTATGTCG ATGGCGTGCG CCGCAACGAG
ACCGCCAGCT TCCGTGCCTA CAGCTCGCCG GCCGAGAGCT TCGCCGACTA CGTGCGCCTG
CTGAAGACCA GCCCGCGCTA CCAGCAGGCC CTGCAGGCCG GCACCGATGT GCAGGGCTTC
GCTCGCGGCC TGCAGCGCGC CGGCTATGCC ACCGATCCGC GTTACGCGGC CAAGATCGCC
GCGATTGCCG GCGGCCCGAC CATCGAGCGC GCCGTAAGCG CCGTGGCCGA TGCAGGCAGC
CGCCTTGGCC AGACCTTCGC CAGCACCGCA ACCGCGGCGC TGGGTATCAC TCGTCGTTGA
 
Protein sequence
MRITPAFDLH PAQQNDPAKI DKVARQLEGQ FAQMLVKSMR DASFGDSLFP GENKMFRDMY 
DQKIAEAMTR GKGLGLSGMI SRQLSGQAAE GPPLDTRVDP AKASRAYQLN APAKPAPSLP
LEDGGQAVRL LQQMAAGAQH GAQAAVAPME QALDLIAGRE SSSMHRSLGT DDPYIGSLQG
DDWAASSDQW SATASNRGTA INPADAMATR TAVAQLGEHT PEGFVASIWQ HAQSAAKELG
VDARALVAQA ALETGWGKRH IKHADGSTSH NLFGIKANGW NGQRAVAGTH EYVDGVRRNE
TASFRAYSSP AESFADYVRL LKTSPRYQQA LQAGTDVQGF ARGLQRAGYA TDPRYAAKIA
AIAGGPTIER AVSAVADAGS RLGQTFASTA TAALGITRR